LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan17g0291	ATGAAGTCTCAGAATAATGGAGCTCCCCCACCGGGACAAGAGAACCTCCCATGTCCACGTTGTGAATCCATCAACACTAAGTTCTGCTACTTCAACAACTACAACCTCTCTCAGCCACGTCATTTCTGCAAGGCATGCCGTCGCTACTGGACTCACGGCGGCACCCTCCGCGACATTCCCGTTGGCGGTGGCACTCGCAAGAACGCAAAGCGCTCCCACACACTCTCTTCAAATACAACAGTGACTTCTTCTGTTAGGGACCACACAACGTTGATTCCAATCCCTTCAACAACTCAGGGAACAACGATGCAGGCAAATCCTGTGAGTGTGTGTGGGCCCGGGGGATTTACTTCGTTGCTCAACAATGGGCTTGGGCTTGAAGATGTTGGATTTGGTATGGGGAGAGTTAGCTGGGCTTTCACAGAGGTAGTGAATAGCACCAACAATGGCGGTGGTGTTGCGGTTGCGGGTTCTGGTGTTGGGAACATGTGGCAGTTTGAAACTGGTGTGGAAAGTGGGTTTGTTGGCGGAGAATGCTTCTCTTGGCCTGGGCTTGCAATTTCAACACTCGGATATGGTCTCAAATGA	588	0.5136	MKSQNNGAPPPGQENLPCPRCESINTKFCYFNNYNLSQPRHFCKACRRYWTHGGTLRDIPVGGGTRKNAKRSHTLSSNTTVTSSVRDHTTLIPIPSTTQGTTMQANPVSVCGPGGFTSLLNNGLGLEDVGFGMGRVSWAFTEVVNSTNNGGGVAVAGSGVGNMWQFETGVESGFVGGECFSWPGLAISTLGYGLK*	196

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan17g0291	195	Pfam	Dof domain, zinc finger	14	70	IPR003851	GO:0003677\|GO:0006355
	Lan17g0291	195	ProSitePatterns	Zinc finger Dof-type signature.	18	54	IPR003851	GO:0003677\|GO:0006355
	Lan17g0291	195	PANTHER	DOF ZINC FINGER PROTEIN DOF3.4	2	191	-	-
	Lan17g0291	195	ProSiteProfiles	Zinc finger Dof-type profile.	16	70	IPR003851	GO:0003677\|GO:0006355
	Lan17g0291	195	PANTHER	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	2	191	IPR045174	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan17g0291	Lan-Chr17	2037078	2038304	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan17g0291	13	195	C2C2-Dof Transcription Factor Family	AT3G50410	45.494	3.11e-51	164

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2C2-Dof	Lan17g0291		zf-Dof	3.8e-33	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan17g0291	-		-	tcc:18611048	225.713