Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0124 ATGGGTTTGAGTTCTAATCAGGTTTCTAATAGAAGGGTTGGTTGGGACCCAACGTTATTGGAAGCACAAAATTTGGAGCTACCACAACTTCATGATTCAATGAGGAAACAACATCACCATAATCAGCAACCGGAGTTTGTGAAATGCCCAAGATGTGATTCAACAAACACCAAGTTTTGCTACTACAACAATTACAACAAGTCTCAACCGCGCCATTTCTGTAGAGCTTGTAAGAGGCACTGGACTAAAGGTGGAACACTAAGAAATGTTCCTGTTGGTGGTGGCAGAAAGAATAAGAGAGTAAAAAAACCAACCACACCACTCTCAACAACAACCACAACTTCTATTACCCTAACAAGTGTTGCTTCTCTTGAAGTAGATCATGATCACAAAGGAAAACCTACTTCTCTTTACCAACCTTTGATTTGTCCACAACCATCTATGGATAATATTATTTGTACTACAAGAGATTCAGAAGATAAAGACTTTGGTATAGGTAATGGAATCTTTCTGAGTTCAAGTATTATGCCTCATACTGAAAACCAAAGCATGATCTTCCCTTTTTCAACAACTTCAAGCTCTTTTGACACAAACCCATGTTCTATATCAACCTCTTTGCCATCCTCCAATGTGTATAACTATGGAGAAGAGTTTAAAACAATGGAGGAATCAACCATCAACAGCATGATGCCTATAACTAGTGGCAATAACACACCACAATGGGAGATTATGCCTGCAACTGGTATTGGCATGGGAATGTCATCAAACTATTGGAGTTGGGAAGATATTGATTCATTTGTCTCAACTGACATTAATGTTCCTTGGGATGATGATTCTGATGTCAAACCCTGA 852 0.3873 MGLSSNQVSNRRVGWDPTLLEAQNLELPQLHDSMRKQHHHNQQPEFVKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKPTTPLSTTTTTSITLTSVASLEVDHDHKGKPTSLYQPLICPQPSMDNIICTTRDSEDKDFGIGNGIFLSSSIMPHTENQSMIFPFSTTSSSFDTNPCSISTSLPSSNVYNYGEEFKTMEESTINSMMPITSGNNTPQWEIMPATGIGMGMSSNYWSWEDIDSFVSTDINVPWDDDSDVKP* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0124 283 PANTHER OS06G0284500 PROTEIN 36 214 - -
Lan16g0124 283 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 214 IPR045174 GO:0003700|GO:0006355
Lan16g0124 283 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Lan16g0124 283 MobiDBLite consensus disorder prediction 88 111 - -
Lan16g0124 283 Pfam Dof domain, zinc finger 46 99 IPR003851 GO:0003677|GO:0006355
Lan16g0124 283 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0124 Lan-Chr16 985331 987058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0124 47 104 C2C2-Dof Transcription Factor Family AT1G28310 83.051 1.32e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan16g0124 zf-Dof 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0124 - - gmx:778119 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0694 4 9369112 9370959 Lan16g0124 16 985331 987058 LSH
Lan17g0694 17 6121971 6123235 Lan16g0124 16 985331 987058 PCT
Lan6g0713 6 6326058 6327339 Lan16g0124 16 985331 987058 PCT
Lan16g0124 16 985331 987058 Lan17g0694 17 6121971 6123235 PCT
Lan16g0124 16 985331 987058 Lan6g0713 6 6326058 6327339 PCT