LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan15g1202	ATGAAGGCAATTGGGTTATATTGGTCGGCGAGAATGGCTCAAGAGATTCGCAAAAACGACGTCGGATTATCATCGAGTAGTAGTAGTAGCAGCAGACGATTATGGCCTTCTGTTCTCCGTTGGATTCCAACTTCCACCGATCACATCATCGATTCCGAGAAGCGCCTTCTTTCTATTCTCAAGACTCCTTATGTTCAAGAACATGTTAATATAGGTTCTGGTCCTCCTGGCTCAAAAGTCAGATGGTTCCGATCATTGAGCAACAAACCGCGGTTTATTAACACTGTTACATTTGACAGTAAAGATGATTCTCCCACACTTGTAATGGTTCATGGATATGGTGCTTCCCAGGGTTTCTTTTTTCGCAATTTCGATGCTCTTGCCAGTCGTTTCAGAGTTATTGCTGTTGACCAACTAGGCTGGGGTGGATCAAGCAGGCCTGATTTTACATGCAGAAGCACTGAAGAAACAGAGGCATGGTTCATTGATTCTTTTGAGGAGTGGAGAAAAGCCCAAAACCTGAGCAAATTTATACTACTTGGACATTCATTTGGTGGTTATGTTGCTGCAAAATATGCCCTCAAGCACCCTGAGCATGTACAACACTTGATTTTGGTGGGATCTGCTGGATTTTCATCAGAATCAGATGCTAATCAGTCTGAGTGGTTTACAAAGTTTCGAACAACATGGAAAGGATCAGTTATGAACCATCTATGGGAATCTAATTTCACACCACAAAAACTCATCAGGGGTTTAGGTCCTTGGGGTCCTGATATTGTCCGCAAGTATACAAGTGCTAGGTTTGGTACACATTCAACTGGGGAGGTACTGACCGAAGAGGAATCAAGATTGCTTACAGATTATGTTTACCATACGTTAGCGGCCAAAGCTAGTGGGGAGCTGTGCTTAAAGTATATATTTTCGTTTGGAGCATTTACTAAGTCGCCTCTTGTTGGCAGTGCCTCGGAGTGGAAGGTGCCGACGACATTCATATATGGTTTCCAAGATTGGATGAAATATGAAGGCGCCCAAGAAGCTCGCAAGCATATGAAGGTTCCATGTGAAATCATCAGGGTCCCCATGGGTGGCCACTTTGTGTTCATTGACAATCCAAATGCTTTCCATTCTTCTGTGTTTTATGCTTGTAGAAAGTTTCTTACACCTGATCCAGATAATGAACCCCTTCCTCAAGGGCTAACCTTAGCTTAA	1209	0.4326	MKAIGLYWSARMAQEIRKNDVGLSSSSSSSSRRLWPSVLRWIPTSTDHIIDSEKRLLSILKTPYVQEHVNIGSGPPGSKVRWFRSLSNKPRFINTVTFDSKDDSPTLVMVHGYGASQGFFFRNFDALASRFRVIAVDQLGWGGSSRPDFTCRSTEETEAWFIDSFEEWRKAQNLSKFILLGHSFGGYVAAKYALKHPEHVQHLILVGSAGFSSESDANQSEWFTKFRTTWKGSVMNHLWESNFTPQKLIRGLGPWGPDIVRKYTSARFGTHSTGEVLTEEESRLLTDYVYHTLAAKASGELCLKYIFSFGAFTKSPLVGSASEWKVPTTFIYGFQDWMKYEGAQEARKHMKVPCEIIRVPMGGHFVFIDNPNAFHSSVFYACRKFLTPDPDNEPLPQGLTLA*	403

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan15g1202	402	PANTHER	RE40534P-RELATED	26	389	-	-
	Lan15g1202	402	PRINTS	Epoxide hydrolase signature	130	145	IPR000639	GO:0003824
	Lan15g1202	402	PRINTS	Epoxide hydrolase signature	193	206	IPR000639	GO:0003824
	Lan15g1202	402	PRINTS	Epoxide hydrolase signature	326	342	IPR000639	GO:0003824
	Lan15g1202	402	PRINTS	Epoxide hydrolase signature	359	381	IPR000639	GO:0003824
	Lan15g1202	402	Gene3D	alpha/beta hydrolase	91	382	IPR029058	-
	Lan15g1202	402	SUPERFAMILY	alpha/beta-Hydrolases	94	377	IPR029058	-
	Lan15g1202	402	Pfam	alpha/beta hydrolase fold	105	371	IPR000073	-
	Lan15g1202	402	PRINTS	Alpha/beta hydrolase fold signature	130	145	IPR000073	-
	Lan15g1202	402	PRINTS	Alpha/beta hydrolase fold signature	179	192	IPR000073	-
	Lan15g1202	402	PRINTS	Alpha/beta hydrolase fold signature	193	206	IPR000073	-
	Lan15g1202	402	PANTHER	BNAA01G13630D PROTEIN	26	389	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan15g1202	Lan-Chr15	20486231	20490924	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan3g0455	3	4105354	4116824	Lan15g1202	15	20486231	20490924	PCT
	Lan15g1202	15	20486231	20490924	Lan3g0455	3	4105354	4116824	PCT