Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1199 ATGGCTCCTCGTTACCCACTTTTAACCCTCTTCCTTATTTCCGCCGCCGTAGCAACCGCCATATACGCCGAGCGAATCGACAATAACGACCTTCTGATCCGTCAAGTGGTGGCGGACACGGAGGACCACCTGCTAAATGCGGAGGAGCACCACTTCTCCACCTTCAAGGCCAAGTTCGGCAAGACTTACGCCACAAAAGAGGAACACGATTACCGCTTCGGTGTGTTCAAGAAAAACTTACTACGAGCCAAGTCACACCAAAAGCTTGATCCCTCCGCCGTCCACGGCGTAACGAAGTTCTCCGATCTTACTCACTCCGAATTCCGCCGCCAGTTCCTCGGCCTTAACAAGCCTCTCCGTCTTCCTAACGATGCTCACAAGGCTCCTATCCTTCCAACGAACGATCTACCTACAGATTTTGATTGGAGAGACCATGGAGCCGTCACTCCCGTGAAGAATCAGGGGTCGTGTGGATCATGTTGGTCGTTTAGTACCACAGGAGCACTGGAAGGAGCTCATTTCTTGGCCACTGGCGAGCTAGTGAGCCTTAGTGAGCAACAGCTTGTGGATTGTGATCATGAGTGTGATCCGGAAGAACGTGGAGCATGTGACTCAGGGTGTAATGGTGGATTAATGAACACTGCATTTGAGTACACACTTAAGGCTGGTGGGCTAGTGCCAGAAAAGGACTATCCTTACACGGGAAGAGATCGTGGCGCCTGCAAATTTGACAAAACCAAAATTGCTGCTTCCATATCTAATTTCAGTGTTGTTTCCCTTGACGAAGATCAAATTGCAGCAAATCTGGTTAAGAATGGCCCTCTTGCAGTTGGTATCAATGCAGTTTATATGCAAACTTATATAGGTGGTGTCTCATGCCCATACATCTGTGGTAAGAATTTGGATCATGGGGTTCTTCTTGTGGGCTATGGTGCTGCGGATTATGCTCCGATTCGGCTGAAGGAAACCTTACTGGATCATAAAGAACTCATGGAGAGAGTTGGGGAGAAGACGGATATTACAAAATCTGCAGAGGTCACAATTTATGTGGAGTGGATTCCATGGTCTCAACCGTAG 1077 0.4865 MAPRYPLLTLFLISAAVATAIYAERIDNNDLLIRQVVADTEDHLLNAEEHHFSTFKAKFGKTYATKEEHDYRFGVFKKNLLRAKSHQKLDPSAVHGVTKFSDLTHSEFRRQFLGLNKPLRLPNDAHKAPILPTNDLPTDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPEERGACDSGCNGGLMNTAFEYTLKAGGLVPEKDYPYTGRDRGACKFDKTKIAASISNFSVVSLDEDQIAANLVKNGPLAVGINAVYMQTYIGGVSCPYICGKNLDHGVLLVGYGAADYAPIRLKETLLDHKELMERVGEKTDITKSAEVTIYVEWIPWSQP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1199 358 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 301 311 IPR025660 -
Lan15g1199 358 PRINTS Papain cysteine protease (C1) family signature 154 169 IPR000668 GO:0006508|GO:0008234
Lan15g1199 358 PRINTS Papain cysteine protease (C1) family signature 303 313 IPR000668 GO:0006508|GO:0008234
Lan15g1199 358 CDD Peptidase_C1A 137 314 IPR039417 -
Lan15g1199 358 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 154 165 IPR000169 -
Lan15g1199 358 PANTHER CYSTEINE PROTEASE RD19C-RELATED 24 317 - -
Lan15g1199 358 SMART pept_c1 136 351 IPR000668 GO:0006508|GO:0008234
Lan15g1199 358 Gene3D Cysteine proteinases 23 322 - -
Lan15g1199 358 SUPERFAMILY Cysteine proteinases 50 313 IPR038765 -
Lan15g1199 358 Pfam Cathepsin propeptide inhibitor domain (I29) 52 108 IPR013201 -
Lan15g1199 358 Pfam Papain family cysteine protease 136 314 IPR000668 GO:0006508|GO:0008234
Lan15g1199 358 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 24 317 - -
Lan15g1199 358 SMART Inhibitor_I29_2 52 108 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1199 Lan-Chr15 20470598 20472840 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0545 10 4471656 4474517 Lan15g1199 15 20470598 20472840 PCT
Lan5g0442 5 9670198 9673499 Lan15g1199 15 20470598 20472840 PCT
Lan15g1199 15 20470598 20472840 Lan10g0545 10 4471656 4474517 PCT
Lan15g1199 15 20470598 20472840 Lan5g0442 5 9670198 9673499 PCT