Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1196 ATGGCATTCCCACAGCTTACTTCATCTTCCTCCATACCTCACAACCCTTCCTTCAACCCTAAATTCCAAACATCAGCACCACCGCAACATGTTTATATTATCCAGCGCCGCCGTACCAACACGAACTCCCTCCTCCGCTGCTCCGCCTCCTCCTTCTCCGATAATCATCACACTAACTCTCCCAAATCCGACGACCTGGTTGACCTCCCTCTCTTCCCACTGCCCTTAGTCCTCTTCCCAGGCGCCATCCTCCCTCTCCAGATCTTCGAGTTCCGCTACCGCATCATGATGCAAACTCTCCTCCACACCGACCTCCGTTTCGGCGTCATCTACACCGACGCCGTCTCCGGCACCGCCGACGTCGGATGCGTCGGAGAAGTCATAAAACACGAGCGCCTCGTCGACGATCGCTTCTTCCTAATCTGCAAGGGACAGGAGCGGTTCCGCGTTAATAATTTGGTCCGAACCAAACCCTATCTTGTGGCTCAGGTGACGTGGCTTGAGGATAGGCCTTCTTCTGGTTCGGAGGAAACGAACCTTGACGGTTTGGCTGAAGAGGTAGAGACTTATATGAAAGATGTTATTCGATTATCGAACCGTTTGAGTGGGAAACCGGAGAAGGAGGTTGAGGATTTGAGAAGGAACCTGTTTCCGACGCCGTTTTCGTTCTTCGTCGGAAGCACCTTCGAGGGAGCACCGAGAGAACAACAAGCATTGCTTGAATTGGAGGATACTGGTGCGAGATTGAAGAAGGAGAAAGAAACTCTGAGGAATACGCTTAATTACCTCACTGCTGCTTCTGCTGTCAAAGACGTTTTCCCTTCTTCATCTTCTTGA 837 0.5149 MAFPQLTSSSSIPHNPSFNPKFQTSAPPQHVYIIQRRRTNTNSLLRCSASSFSDNHHTNSPKSDDLVDLPLFPLPLVLFPGAILPLQIFEFRYRIMMQTLLHTDLRFGVIYTDAVSGTADVGCVGEVIKHERLVDDRFFLICKGQERFRVNNLVRTKPYLVAQVTWLEDRPSSGSEETNLDGLAEEVETYMKDVIRLSNRLSGKPEKEVEDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTGARLKKEKETLRNTLNYLTAASAVKDVFPSSSS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1196 278 Pfam ATP-dependent protease La (LON) substrate-binding domain 69 256 IPR003111 -
Lan15g1196 278 ProSiteProfiles Lon N-terminal domain profile. 69 258 IPR003111 -
Lan15g1196 278 MobiDBLite consensus disorder prediction 1 25 - -
Lan15g1196 278 Coils Coil 180 200 - -
Lan15g1196 278 Coils Coil 239 259 - -
Lan15g1196 278 SMART lon_5 68 258 IPR003111 -
Lan15g1196 278 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 7 276 - -
Lan15g1196 278 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 7 276 - -
Lan15g1196 278 Gene3D - 67 169 IPR046336 -
Lan15g1196 278 SUPERFAMILY PUA domain-like 68 257 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1196 Lan-Chr15 20459964 20460973 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1196 15 20459964 20460973 Lan3g1259 3 24682547 24683629 LSH
Lan3g1259 3 24682547 24683629 Lan15g1196 15 20459964 20460973 PCT
Lan10g0599 10 5231962 5244355 Lan15g1196 15 20459964 20460973 PCT
Lan5g0415 5 9028545 9055374 Lan15g1196 15 20459964 20460973 PCT
Lan15g1196 15 20459964 20460973 Lan3g1259 3 24682547 24683629 PCT
Lan15g1196 15 20459964 20460973 Lan10g0599 10 5231962 5244355 PCT
Lan15g1196 15 20459964 20460973 Lan5g0415 5 9028545 9055374 PCT