Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0661 ATGGACACAAGTCAGTGGGCACAGGGTATTGGAGTGGTTAAACCTATGGAAGGTTCTTCAAAACCACCTCAATCTCAACCTCCTATGTTAGAGAGATCAAGGGCAAGGCCTCAAAAGGATCAAGCTTTGAACTGTCCAAGGTGCAATTCAACAAACACTAAATTCTGTTACTACAATAACTATAGTCTCTCTCAGCCAAGGTACTTTTGCAAAACATGCAGAAGGTATTGGACTGAAGGTGGTTCCTTGAGAAATGTTCCTGTTGGTGGTGGCTCAAGAAAGAACAAAAGATCCATGAATCCTTCAACATCAACAACAACAACTACTTCTTCACAACATGGTCCATCAAATAAGAAGCTTCCTGATCTATCAACAACACCAAACAATTTCTCTCACTCAGCTTCTCAGAACCCAAAGATCCATCATGGCCAAGATCTTAACTTAGCATATCCACCACCAACTGAAGACTATAGCACCTTATCTAAATTTATTGAGGTTCCTTATAGCACTGAATTAGACAAAACTCAACATCACCACCTTCAAAATCAAAGTTCTTCAGCTATGGAACTTCTCAAAACTGGGATCACTACTTCTTTCATGCCTATGACCTTGTCAGATTCCAGCACTATGTATAACTCAGCTGGTTTTCCACCTTTGCAAGATTTTATTAAGCCTGGCCTTAACTTCAGTCTTGAAGGGTTTGAAAATGGCTATGGTGGTATCCATGGAATTCATCAAGATGGTGCTAGTGGTGCAAGGATCTTGTTTCCTCCTGAGAATTTGAAGCAACAGGTTCCAAGCAGTGCTGAGTTTCATGAGCAGAATAGAAATCAAGGGGATTCAAGTGGCTATTGGAATGGAATGTTAGGTGGTGGATCATGGTAG 885 0.409 MDTSQWAQGIGVVKPMEGSSKPPQSQPPMLERSRARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSMNPSTSTTTTTSSQHGPSNKKLPDLSTTPNNFSHSASQNPKIHHGQDLNLAYPPPTEDYSTLSKFIEVPYSTELDKTQHHHLQNQSSSAMELLKTGITTSFMPMTLSDSSTMYNSAGFPPLQDFIKPGLNFSLEGFENGYGGIHGIHQDGASGARILFPPENLKQQVPSSAEFHEQNRNQGDSSGYWNGMLGGGSW* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0661 294 MobiDBLite consensus disorder prediction 81 152 - -
Lan15g0661 294 MobiDBLite consensus disorder prediction 269 284 - -
Lan15g0661 294 Pfam Dof domain, zinc finger 40 97 IPR003851 GO:0003677|GO:0006355
Lan15g0661 294 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Lan15g0661 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 291 IPR045174 GO:0003700|GO:0006355
Lan15g0661 294 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Lan15g0661 294 MobiDBLite consensus disorder prediction 95 142 - -
Lan15g0661 294 MobiDBLite consensus disorder prediction 1 44 - -
Lan15g0661 294 PANTHER DOF ZINC FINGER PROTEIN DOF4.6-LIKE 1 291 - -
Lan15g0661 294 MobiDBLite consensus disorder prediction 269 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0661 Lan-Chr15 15192324 15194221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0661 30 294 C2C2-Dof Transcription Factor Family AT3G61850 43.158 1.68e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan15g0661 zf-Dof 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0661 - - lang:109326143 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0661 15 15192324 15194221 Lan15g0661 15 15192324 15194221 ECH