Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0426 ATGCTGGAAACTAAAGACCCCGTAATTACGCTCTTTGGCCAGAAGATTCCCTTTCCGGAGGAGACTCCTACCATTTCCGGCGACAAGATGGCCTCCTCCGTCGCGGTGATTGATGTCAACAAAGATGAAGAGGAAGAAGAGACACAATTTGATGCTTCAGAGTCTGAGGAGGAAGAGAAAGACCAAGAGACAAAGGATCCTCAAGCTGAAGAAGTTACTGAGAAAAAGAAAGAGGATGATTCTCTTCCAAGTGCTGCAGAGACTAATAAGAATTCAGGGGCATTACCTGATGCTATTCAGAACCCAAAGACACCTTCTATAGACGAAGAAACTGAAAATTCAAAGAAGGGTAAGTTAGAGACTGATCAAAGTGATTCAACCAACAACTCACAAGATAAAACCCTGAATAAGCCAGATAAAGTGATTCCATGTCCACGCTGCAATAGCATGGACACAAAGTTCTGTTACTATAACAATTACAATGTCAACCAGCCGCGATATTTCTGCAAAGCATGCCAAAGATACTGGACTGCGGGTGGCACCATGAGGAATGTACCAGTTGGGGCTGGGCGACGAAAGAACAAGAACTTGGCCTCACATTATCCCCATATCACAATTTCTGAGGAACTTCAGGTTGCTAGATTTGACGTTCCTAATGCAACCCATCTTCCTACTTTAAAAAAAAATGTTAGAGTCCTGGGCTTTGGATTAGACCCACCAAATTGTGATTCCATGGCATCTGTCATTAATCGTTCAGATAAAGAAATTCTTAATGGCACAGAAAGTGGGTTTCTTAGCAATGAGAATCAAAGGAACCCTTGCACAGTTGGGGAGAAAGGTGGTGACTGCTCAACTACGTCTTCCATTACAGTTTCAAATTCCGTAGAGGAAAATAGCAAAAGCACTTCCCAGGAATCTTTGCAACTACCAAATAATGGTTACCTTCCTCGTGTTCCTTGCATTGCTAGTGTTCCTTATCCATGGAATTATTCAACTCCCTCACCTGCTTTCTGTCCTCCAGGGTTTCCCATGCCATTCTATCCAGCAGCCTTTTGGAATTGCAGTGTGCCGGGGAATTGGAATGTTCCCTGGTTATCCTCACATTCATCTGCCCCAACCCCAAACTCTCCAAGCTCTGGTCAAAATTTGCCGACTCTTGGGAAGCACTCAAGAGATGATGACATGACTGAACAAGACTGTTCGCATGATGAACCACCAAAGCAGAGGAACGGATCTGTTCTCGTCCCGAAAACGTTAAGAATTGATGACCCAAGTGAAGCTGCAAAGAGTTCTATATGGGAAACACTAGGAATTAAGAATGAATATGTCGGTGGGGGAAGTATGGTTAAGGCCTTCCAATCAAAGAAGGATGGAAAGAACAATAACCATGTTGTTGAAACCTTGCCAGCTTTGCGGGCTAACCCTGCAGCTTTGTCTAGATCCCTTAATTTTCATGAGAACTCCTGA 1467 0.4376 MLETKDPVITLFGQKIPFPEETPTISGDKMASSVAVIDVNKDEEEEETQFDASESEEEEKDQETKDPQAEEVTEKKKEDDSLPSAAETNKNSGALPDAIQNPKTPSIDEETENSKKGKLETDQSDSTNNSQDKTLNKPDKVIPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNLASHYPHITISEELQVARFDVPNATHLPTLKKNVRVLGFGLDPPNCDSMASVINRSDKEILNGTESGFLSNENQRNPCTVGEKGGDCSTTSSITVSNSVEENSKSTSQESLQLPNNGYLPRVPCIASVPYPWNYSTPSPAFCPPGFPMPFYPAAFWNCSVPGNWNVPWLSSHSSAPTPNSPSSGQNLPTLGKHSRDDDMTEQDCSHDEPPKQRNGSVLVPKTLRIDDPSEAAKSSIWETLGIKNEYVGGGSMVKAFQSKKDGKNNNHVVETLPALRANPAALSRSLNFHENS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0426 488 MobiDBLite consensus disorder prediction 261 309 - -
Lan15g0426 488 Pfam Dof domain, zinc finger 139 196 IPR003851 GO:0003677|GO:0006355
Lan15g0426 488 MobiDBLite consensus disorder prediction 367 386 - -
Lan15g0426 488 MobiDBLite consensus disorder prediction 387 406 - -
Lan15g0426 488 PANTHER CYCLIC DOF FACTOR 2 1 487 IPR045174 GO:0003700|GO:0006355
Lan15g0426 488 MobiDBLite consensus disorder prediction 367 413 - -
Lan15g0426 488 ProSiteProfiles Zinc finger Dof-type profile. 142 196 IPR003851 GO:0003677|GO:0006355
Lan15g0426 488 MobiDBLite consensus disorder prediction 65 84 - -
Lan15g0426 488 MobiDBLite consensus disorder prediction 15 142 - -
Lan15g0426 488 MobiDBLite consensus disorder prediction 108 122 - -
Lan15g0426 488 MobiDBLite consensus disorder prediction 40 64 - -
Lan15g0426 488 MobiDBLite consensus disorder prediction 85 107 - -
Lan15g0426 488 ProSitePatterns Zinc finger Dof-type signature. 144 180 IPR003851 GO:0003677|GO:0006355
Lan15g0426 488 PANTHER CYCLIC DOF FACTOR 1 1 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0426 Lan-Chr15 9455554 9458768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0426 1 486 C2C2-Dof Transcription Factor Family AT3G47500 44.024 2.17e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan15g0426 zf-Dof 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0426 - - jre:109000197 581.252