Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0938 ATGGCTGGGTTATTTTCTTTAGGTCAAGAAAACAAGGAAGGAGAAGAAGATAACAACAGAAATAGTTTACTATTGTTTAGGAACGAAGAGATCTACAACAAAGGGTTTGAGATATGGCCACAATCTTATCATCAAAACCAAAGCTTGAACAACTACTATTCATCATATGGTGTGGGTCCTAGTCGAAGGAACTCAATACCTTCATCCAACGTTGGTTACGACGACGTTTCGCTATCTGATGAGTCAACGAGATTTGGATTAACAGTAATGAGAACAAGTGGAAGTAGCAGTAGTGGAATGAATTGTCAGGACTGTGGGAACCATGCTAAGAAAGAGTGTGTTCATATGAGATGCAGAACTTGTTGTAAGAGTCGAGGGTTTCAGTGCCAAACTCATGTTAAGAGCACTTGGGTACCCGCTGCTAAACGACGTGAACGCCAACAACACAACACTTCTAAACGACATAGACACCATCAAGTTGTTGAATATGATTACTTAGGGTTGGAAGTGGGAGTACAATTTCCACATGAAGTGAACTCAACAACGGTGTTTCGATGTGTAAAAGTAACAGCAGTGGACACTCCAGAAGAGCAATACGCGTATCAAGCAGCTATCAACATCGGAGGACACATTTTCAAGGGAATTCTCTATGATCAAGGACCAGAAGGTTCTTACACCAATATTGAGGGTTCATCTGGTGGAGTAGGAGTAGGAGTTGAAGCCCAACAACAAATTGGTCTACTAACTTCTCCAACTACAGTTACAACCACTGGGAATCTATTTGATCCTTCTTCACTTTACCCTCCTCCTCTTATGAATGCTTTCATGGCTGGTACGCAGTTTTTCCCACCCCCAAGATCCTAA 864 0.4178 MAGLFSLGQENKEGEEDNNRNSLLLFRNEEIYNKGFEIWPQSYHQNQSLNNYYSSYGVGPSRRNSIPSSNVGYDDVSLSDESTRFGLTVMRTSGSSSSGMNCQDCGNHAKKECVHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQHNTSKRHRHHQVVEYDYLGLEVGVQFPHEVNSTTVFRCVKVTAVDTPEEQYAYQAAINIGGHIFKGILYDQGPEGSYTNIEGSSGGVGVGVEAQQQIGLLTSPTTVTTTGNLFDPSSLYPPPLMNAFMAGTQFFPPPRS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0938 287 Pfam Domain of unknown function (DUF702) 99 222 - -
Lan14g0938 287 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 101 143 IPR006510 -
Lan14g0938 287 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 285 - -
Lan14g0938 287 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 285 IPR007818 GO:0003700|GO:0006355
Lan14g0938 287 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 173 221 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0938 Lan-Chr14 15800717 15802848 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lan14g0938 DUF702 6.1e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0938 14 15800717 15802848 Lan13g0211 13 1323085 1323570 ECH
Lan14g0938 14 15800717 15802848 Lan14g0938 14 15800717 15802848 ECH
Lan14g0938 14 15800717 15802848 Lan3g1265 3 24721907 24724303 LSH
Lan10g0544 10 4459593 4461785 Lan14g0938 14 15800717 15802848 PCT
Lan3g0458 3 4158103 4160110 Lan14g0938 14 15800717 15802848 PCT
Lan14g0938 14 15800717 15802848 Lan10g0544 10 4459593 4461785 PCT
Lan14g0938 14 15800717 15802848 Lan3g0458 3 4158103 4160110 PCT