Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0936 ATGCTGAAATCAGGCATGGGAATTGAGGAGAGGAAGCAGGTGAAGAAGCCAGCCCAAGCTAGCTCGAGGAAGGGCTGCATGAGAGGTAAAGGAGGCCCCGAAAACGCGAGTTGCAAGTACAAAGGTGTAAGGCAGAGAACTTGGGGGAAATGGGTTGCTGAAATCCGTGAACCAAACCGTGGTGCACGACTTTGGCTTGGGACGTTTGATACGTCGCTTGATGCTGCTTTGGCTTATGACGCTGCAGCGCGTAAGCTTTATGGCGCAGATGCAAAGCTCAATCTACCAGAGCTGTGTGTGAATTCTCAGTCTCTAGCGTCTTCTGTTAGCACCCAGGTTACACAAATGGGAGGGAATTTGCAACAAACTTGTCAGATCATTCAACAAAACTCGGACATGGTCAATTATAATATGATGAATACCAACCCACCAGTGTCTATGGCTTCTCAGCAAGTTGGAGTTGGACCTATTTACAGCAACACCAATGATTCCATTGTGTCTCTTCCCTATTTGGATACTAATATTCAGCCACTTGAAAGCTATGCAAAGTCCATGGACTACAACGAAGAAGAGTTTTTTCCATTCTGGGGGACAATGAATGAAGAACGTTCTCCGGTGTTAGATGAATCCATCTATGCAGAAGCTGCAATGTCTTTAGATATTCCTATGATTGCAGAAACTGGCATGTACCCAACAAATGGAAACTTGGCCTTGGGTGACTTAAATGCTTGGGACTCTATGCACACTCCATGGTGCATGTAA 762 0.458 MLKSGMGIEERKQVKKPAQASSRKGCMRGKGGPENASCKYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSLDAALAYDAAARKLYGADAKLNLPELCVNSQSLASSVSTQVTQMGGNLQQTCQIIQQNSDMVNYNMMNTNPPVSMASQQVGVGPIYSNTNDSIVSLPYLDTNIQPLESYAKSMDYNEEEFFPFWGTMNEERSPVLDESIYAEAAMSLDIPMIAETGMYPTNGNLALGDLNAWDSMHTPWCM* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0936 253 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 7 249 - -
Lan14g0936 253 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Lan14g0936 253 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Lan14g0936 253 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Lan14g0936 253 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Lan14g0936 253 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D-LIKE 7 249 - -
Lan14g0936 253 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Lan14g0936 253 MobiDBLite consensus disorder prediction 1 17 - -
Lan14g0936 253 MobiDBLite consensus disorder prediction 1 33 - -
Lan14g0936 253 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Lan14g0936 253 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Lan14g0936 253 Pfam AP2 domain 38 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0936 Lan-Chr14 15783385 15784855 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan14g0936 AP2 4.2e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0936 14 15783385 15784855 Lan14g0936 14 15783385 15784855 ECH
Lan15g1197 15 20462366 20463664 Lan14g0936 14 15783385 15784855 LSH
Lan5g0440 5 9597046 9597865 Lan14g0936 14 15783385 15784855 PCT
Lan14g0936 14 15783385 15784855 Lan5g0440 5 9597046 9597865 PCT