Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0934 ATGTCAAACTCTATAACCCATCAAAACCAATATGAAAACCAAGAGTTAGATGCTTATGGTTCTTCTTTAAGAAACAATAATGCATACCCTTTGGCCTTAGGAGTTTTTCCAAGCAATATTACATCCATTGGAGACAGAATGTCACTAACTGAGGGTTCTGAGATGAGTCACACAAGACATTTGATGGATCTTCTTGGAGCTGCTAATGAGAACAATCATCAAACTCAAGGCTTATTATCCCTTTCTTTAGGCTCTCACATGCTTGTTCCTTCTGATGAATACAGGCATAGACCCTTAAATCAAGGTCTCATGACCCCTAATTACTTCATGCCTGGCCAAGAAACAAGGGAAGCTTGTAACCCTGCAGTGGAGCATCATCATATAACTAGTGACTATTTTTTCACAAGTGGTGCTAGTTTTGCTTCATCTTCCACTTCATTGAACCTTTCTCCTTCTACTTCTTATGAAACTGAGTCTTTTGCTGGTGTTATTTCAAACTCAAGGTATCTTAAACCATCACAATCTCTTCTTGAAGATATTGTTGGTGTTGGTGCAAATGTGGTTGATAGAATGAATGAAAAGTATGTAGAGAAATTGTTTCATGGAAGTAGAACAGGTGCTAGAACACTTTCCACTGAGCTGAAAACAGAGTTGGGAAACATTGGACCATTATTAGCTGAAAAACAAGAACATCAAATGAAAATTGCAAAGTTGATTTCTTTGTTGGACGAGGTAGAGAGCAGATATGAAAAATACTACCATCAAATGGAAGAAGTGGTTCAATCCTTTGAAATGATAGCAGGTCTTGGAGCTGCAAAGTGTTACACTGCTATGGCACTTCAAGCAATGTCAAGGCATTTTTGCAGCTTGAGAGATGCTATAGTGTCACAAATTAATGTGGAGAAAAGAAAACTCTTTCATGATTTGCCGAAAATCAATAGCGGATTATCTCAACTAAGCCTATTCGATAGAGACAACAGACAGGGTAGAGTGTCACTCCAACAACTTGGGATTATCCAAAGCCAACGCCAAGTATGGAGACCCATCAGAGGGTTGCCTGAAACATCTGTAGTAATTCTTCGTTCTTGGCTTTTCGAGCACTTTCTCCACCCTTATCCTAATGATTCTGAGAAGTTAATGTTGGCATCACAGACAAGTTTAACTAAAAACCAAGTATCAAATTGGTTCATAAATGCTAGAGTACGGCTATGGAAACCAATGATAGAAGAAATGTACAAAGAAGAGTTTGGAGAGTCTTCAGAAGATTCCAACCCACAAGCTAATAACTATTTAACAAGGGAAGAAGATACCACATATTGTGTGGAGGATTGA 1332 0.3836 MSNSITHQNQYENQELDAYGSSLRNNNAYPLALGVFPSNITSIGDRMSLTEGSEMSHTRHLMDLLGAANENNHQTQGLLSLSLGSHMLVPSDEYRHRPLNQGLMTPNYFMPGQETREACNPAVEHHHITSDYFFTSGASFASSSTSLNLSPSTSYETESFAGVISNSRYLKPSQSLLEDIVGVGANVVDRMNEKYVEKLFHGSRTGARTLSTELKTELGNIGPLLAEKQEHQMKIAKLISLLDEVESRYEKYYHQMEEVVQSFEMIAGLGAAKCYTAMALQAMSRHFCSLRDAIVSQINVEKRKLFHDLPKINSGLSQLSLFDRDNRQGRVSLQQLGIIQSQRQVWRPIRGLPETSVVILRSWLFEHFLHPYPNDSEKLMLASQTSLTKNQVSNWFINARVRLWKPMIEEMYKEEFGESSEDSNPQANNYLTREEDTTYCVED* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0934 443 Gene3D - 341 421 - -
Lan14g0934 443 Coils Coil 228 262 - -
Lan14g0934 443 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 25 425 - -
Lan14g0934 443 Pfam Homeobox KN domain 363 402 IPR008422 GO:0003677|GO:0006355
Lan14g0934 443 CDD homeodomain 346 407 IPR001356 GO:0003677
Lan14g0934 443 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 11 25 425 - -
Lan14g0934 443 ProSiteProfiles 'Homeobox' domain profile. 365 406 IPR001356 GO:0003677
Lan14g0934 443 SUPERFAMILY Homeodomain-like 352 413 IPR009057 -
Lan14g0934 443 MobiDBLite consensus disorder prediction 421 435 - -
Lan14g0934 443 SMART HOX_1 346 410 IPR001356 GO:0003677
Lan14g0934 443 SMART prehox3 158 296 IPR006563 -
Lan14g0934 443 Pfam Associated with HOX 163 295 IPR006563 -
Lan14g0934 443 MobiDBLite consensus disorder prediction 415 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0934 Lan-Chr14 15770526 15773139 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lan14g0934 POX 2.4e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0934 14 15770526 15773139 Lan14g0934 14 15770526 15773139 ECH
Lan15g1194 15 20448691 20451139 Lan14g0934 14 15770526 15773139 LSH
Lan14g0934 14 15770526 15773139 Lan3g1255 3 24648158 24650341 LSH
Lan14g0934 14 15770526 15773139 Lan5g0439 5 9564204 9569496 PCT