Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0318 ATGGTTTTATCTTCTCTGCATGTGTGTATGGATTCATCAGATCATTGGTTTCAGGGAACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCACCATCAGGGGACATGCTTACATGCTCAAGGCCCATGATAGAGAGAAGGCTAAGGCCCCCACATGACCAAGCTCTAAATTGCCCAAGGTGTGACTCAACCCACACCAAGTTCTGTTACTACAACAACTATAGCCTCTCTCAGCCAAGGTACTTCTGCAAGACTTGCAGAAGGTACTGGACCAAAGGTGGCACTCTTAGGAACATCCCTGTTGGTGGTGGTTGCAGAAAGAACAAGAAAGTCTCTACCAAGAAGTTCAATGACCAATTACCTAATAATAATCATCAAAACCAACCACAACCTCAAGGATCTAATTCCTATCACCACAACCCTAAAGATCTTCAACTTTCTTTCCCTGATGTGCAATTTTCACAGCTGAGTAATTTTCTTGGGACTAATGCTGCTGGAGCACTAGGAAACCCTGATTTCATGGAGAACAGGTATAATAATATTAATGTTATTCTCAATAACCCTAATAGGCCTATTGACTTCATTGAGAGCAAGGTGGAGGGCATAATTGGGAGTAGCAGTAGTTCTAGGAATTATGATTTTTTTGGAAATAGTGATCATATGAATGGCCAAAATGGGTTGCCATTGGCACCAAATTTTCATTCTCTATACTCTCCTACAGCATTTGGTGCCATGTCTCTTGATGGTGGTGGTAACAATAATAATAGGGGTTATATAATGGATCACTCTTGCCACCGTTTGATGCTTCCATATGATCATGTTACTAATGAGGACCATAATAATTCAATTGATGTGAAGCCAAACCCTAAGCAGCTACTATCCCTTGAATGGCAAGACCAGGGTTGCTCTGATGCTGGGAAAGATTCATTTGGGTATCTTAACGGTCCAGGATCATGGAATGGCATGATGAACGGCTATGGATCTTCCACAACAAACCCTTTGGTCTAG 1008 0.4187 MVLSSLHVCMDSSDHWFQGTIHEESGMDSSSPSGDMLTCSRPMIERRLRPPHDQALNCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTKKFNDQLPNNNHQNQPQPQGSNSYHHNPKDLQLSFPDVQFSQLSNFLGTNAAGALGNPDFMENRYNNINVILNNPNRPIDFIESKVEGIIGSSSSSRNYDFFGNSDHMNGQNGLPLAPNFHSLYSPTAFGAMSLDGGGNNNNRGYIMDHSCHRLMLPYDHVTNEDHNNSIDVKPNPKQLLSLEWQDQGCSDAGKDSFGYLNGPGSWNGMMNGYGSSTTNPLV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0318 335 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 329 IPR045174 GO:0003700|GO:0006355
Lan14g0318 335 MobiDBLite consensus disorder prediction 115 141 - -
Lan14g0318 335 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Lan14g0318 335 Pfam Dof domain, zinc finger 53 110 IPR003851 GO:0003677|GO:0006355
Lan14g0318 335 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Lan14g0318 335 PANTHER - 12 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0318 Lan-Chr14 6180926 6183228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0318 1 335 C2C2-Dof Transcription Factor Family AT5G62940 41.709 2.77e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan14g0318 zf-Dof 2.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0318 - - gmx:778107 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0834 12 15438864 15440743 Lan14g0318 14 6180926 6183228 PCT
Lan1g1412 1 23875223 23877044 Lan14g0318 14 6180926 6183228 PCT
Lan14g0318 14 6180926 6183228 Lan12g0834 12 15438864 15440743 PCT
Lan14g0318 14 6180926 6183228 Lan1g1412 1 23875223 23877044 PCT