Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0813 ATGGAATGCAATAAGGATGAGGCCGTCAGAGCTAAAGAAATTGCTGAGAGGAAGTTTATTGCGAAGGATACTTTGGGTGCAAAGAAGTTTGCATTGAAGGCCCAAAATTTATTTCCTGATCTGGAGGGTATTCCTCAAATGTTAGCAACACTCGATGTGCATATTTCTGCTGAGAATAAAATAAATGGAGAAGTAGATCGGTATAGTATCCTTGGTGTAAACCCCCTTGCTGATGAGGATACAGTCAGAAAACATTACAGGAAGCTAGCTCTCATGCTTCACCCCGATAAGAACAAGTCCGTTGGAGCTGATGGGGCATTTAAACTTATTTCAGAGGCATGGAGTTTACTATCAGATAAAGCTAAAAGGGCAGCATATGATGAGAAGAGAAATGCAAAAGCTAGGAAAGTTTCAACTAAGTTTGCAGGTTCATCCGCGCAAACAGGTGTTAATGGCAGTTACAATTTTACTAAGACTACCTCTTCAAGTGCAAGGACTCAGACGAGTAATGCTAAAGAAACTCAGAAGAGTGCTGCTAAAGAATCTCAGAAGACTAATGCTAAAGAATCTCAGAAGAATAATGCTAAAGAACACACTTCATCTTCTACCAATAAATCCAAATCGAATACATTCTGGACTGTTTGCCATCGATGCAAGATGCAGTATGAGTATCTTAGAATCTATCTTAATCTTAAACTCTTGTGTCCCAATTGCCATGAACCATTTTATGCTGTAGAAACTGCTCCCCCACCTTCAAGTTTTATTCGACCGCCTTCAACATCGTGGACTTTTTCACAGCATCAGGAAAATTCTAGTCGCCAAGTGCCTAACAAGATGAAGTCTAATGCCGGAAAGAAGGCAACTTCAAATGTTGGAGCTGGGGGTTATTGTAAAACTGACTCTAATAACCCTACCAATTTCCAGTGGACTCCATTTTCGAAAACTTCCGGTGTCTCTAATGTAGCTCAAGCTGCTACAGTTGTTCAGCAGGCATATAATAAAGTGAAGCGAGAACGCGTGGAGGCACAGGCAGCTATGAAAGGGGAAGAGGCCTTGAGAAGAAAGCAGCATGTTCCGAAAAAAAGTTACTTCAATCCTGCTAAGAGAAGAAAGGGGTGCACAGATGATGCTAGTGTTGGTAACCATGCTACAGAACATGTAAATGGTGTGGGATTTCCTTGGGATCTTCTTATGACGAAAGCTAGGAAAGAAATTACCAAGAAACTTAGCGAGGTCCAGTCAAATACTGTTGATAAAGCTGTGGTGAAAGAGAATGGAGATGAGTTACAGAAAACAAATGAAGAAGGAGAAAAGTCTGTAAGAAATTCTGAAACATGTGCTCAAAATAACATTGGGAAGGCAGAGGATAGAAAGAGTGGATGTGAAGGCATCGAGACGTTTGCAGTTACTACTACTGCCAAAATTGGTACAAAAGTTTTGGAGACGATACCAATTGATGTCCCCGATTCTGAGTTCCATGATTTTAACAAGGTTCGAACTGAAAAATCTTTTGGAGAAAATCAAGTATGGGCTGCATATGATGACAACGATGGGATGCCTCGAAATTATGCATTGATCCACAGTGTGATCTCTCTGAATCCATTCAAGGTGCGTATCAGGTGGCTCAACTCGAAGACCAACAGTGAACTGGGCCCCATAAATTGGGTTGTTTCAGGCTTTTTAAAAACATGTGGGGATTTCAGAATTGGCAAACTTGAAATCTGTGACTCCATCAATTGTTTTTCTCACAGGGTTAGGTGGGGAAAAGGCAATCATGGCGCCATTTGTATATATCCCAGGAAAGGGGATGTTTGGGCCCTCTATAGGAATTGGTCTCTTTATTGGAATGAGCTAACAGCACATGAGGATATACACAAGTTTGATATGGTTGAAGTACTAGAGGGTTTTACTGAAGAGCAGGGTGTAATTGTTATTCCTCTGATCAAAGTGGCTGGGTTCAAGACAGTATTTCATCACCACTTAGATCCGAGTGAAATCAGGATCATTCCAAGGGAAGAGATGTTTCGGTTCTCTCATCGGGTCCCCTCACACTCACTTACTGGCCAAGATGCTCCAAATGCTCTAAAGGGTTGCATGGTGCTGGACCCAGCTGCTACTCCATCTGAACTTCTCCAGTTGATAGAAACTGTAAAAGAGGAAGACATGATGGACATCGAGGACACTGTTATAAAAGAAATAAGTGACGACGTGAAAGAAGCAGTTGATATGGAAAAGGATGGGGAAGAAAAAGAGGGGGACAATAAAGATATCCAAGAAATAGAAACTTTGCAAGAGAAGAAGATATGCGAAAACTTGTAG 2319 0.4131 MECNKDEAVRAKEIAERKFIAKDTLGAKKFALKAQNLFPDLEGIPQMLATLDVHISAENKINGEVDRYSILGVNPLADEDTVRKHYRKLALMLHPDKNKSVGADGAFKLISEAWSLLSDKAKRAAYDEKRNAKARKVSTKFAGSSAQTGVNGSYNFTKTTSSSARTQTSNAKETQKSAAKESQKTNAKESQKNNAKEHTSSSTNKSKSNTFWTVCHRCKMQYEYLRIYLNLKLLCPNCHEPFYAVETAPPPSSFIRPPSTSWTFSQHQENSSRQVPNKMKSNAGKKATSNVGAGGYCKTDSNNPTNFQWTPFSKTSGVSNVAQAATVVQQAYNKVKRERVEAQAAMKGEEALRRKQHVPKKSYFNPAKRRKGCTDDASVGNHATEHVNGVGFPWDLLMTKARKEITKKLSEVQSNTVDKAVVKENGDELQKTNEEGEKSVRNSETCAQNNIGKAEDRKSGCEGIETFAVTTTAKIGTKVLETIPIDVPDSEFHDFNKVRTEKSFGENQVWAAYDDNDGMPRNYALIHSVISLNPFKVRIRWLNSKTNSELGPINWVVSGFLKTCGDFRIGKLEICDSINCFSHRVRWGKGNHGAICIYPRKGDVWALYRNWSLYWNELTAHEDIHKFDMVEVLEGFTEEQGVIVIPLIKVAGFKTVFHHHLDPSEIRIIPREEMFRFSHRVPSHSLTGQDAPNALKGCMVLDPAATPSELLQLIETVKEEDMMDIEDTVIKEISDDVKEAVDMEKDGEEKEGDNKDIQEIETLQEKKICENL* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0813 772 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lan13g0813 772 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Lan13g0813 772 PANTHER BNAC03G44070D PROTEIN 1 712 - -
Lan13g0813 772 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lan13g0813 772 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lan13g0813 772 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lan13g0813 772 PRINTS DnaJ domain signature 122 141 IPR001623 -
Lan13g0813 772 MobiDBLite consensus disorder prediction 425 441 - -
Lan13g0813 772 CDD DnaJ 68 119 IPR001623 -
Lan13g0813 772 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lan13g0813 772 MobiDBLite consensus disorder prediction 152 176 - -
Lan13g0813 772 PANTHER BNAA04G14940D PROTEIN 1 712 - -
Lan13g0813 772 Pfam DnaJ domain 67 127 IPR001623 -
Lan13g0813 772 MobiDBLite consensus disorder prediction 425 444 - -
Lan13g0813 772 MobiDBLite consensus disorder prediction 177 195 - -
Lan13g0813 772 MobiDBLite consensus disorder prediction 258 288 - -
Lan13g0813 772 Gene3D DnaJ domain 64 184 IPR036869 -
Lan13g0813 772 Coils Coil 332 352 - -
Lan13g0813 772 Pfam Domain of unknown function (DUF3444) 485 689 IPR024593 -
Lan13g0813 772 SMART dnaj_3 65 122 IPR001623 -
Lan13g0813 772 MobiDBLite consensus disorder prediction 152 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0813 Lan-Chr13 8814925 8819261 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0522 10 4185833 4188588 Lan13g0813 13 8814925 8819261 LSH
Lan3g0438 3 3818641 3821109 Lan13g0813 13 8814925 8819261 LSH