Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0713 ATGAGGAAACCTGATATGATGGGGAAAGACAACATTAAGAGCAAGTTAAGGAAGGGTTTGTGGTCACCTGAGGAAGATGAGAAGCTGATAAGACACATGTTAACTAATGGACAAGGTTGTTGGAGTGACATTGCTAGGAATGCTGGTCTCTTGAGGTGTGGAAAAAGTTGTCGTCTTCGTTGGATTAATTACCTGAGACCTGACCTTAAACGTGGTGCATTTTCACCACAAGAGGAAGATCTTATCATTCAACTGCATTCCCTTCTTGGCAATAGGTGGTCTAAAATTGCAGCACATCTATCTAGACGTACAGACAATGAGATAAAGAATTTCTGGAATTCCACATTAAAGAAAAAGATGAAAATGAACACTTCCACTACATCACCAAACAATAGTAATGAGTCATATGAGCCTAATGATATTTTGGGTGGGATCATGCCCATTAATGAACATGACCTCATTACTATGTGCATGGATTGCTCTACATCAACTTCATCATCATCCATGCAATCCATGGTTTCTGCTGATCAATTTGATCCTTTTTCAATGTTGATAAAGAATAATCACTATGACATGACTAATGTCTCAGCAGGTTTTCATGAAATTGCACCATGCATGAACCAAGTTGGCATGGTAGAGAGGCATCATGGTAATTATGGGATATTAGAGCCTAATAACAAAATGGGGTTATTAGAAAGAGAGTTCTCCCTTCCTACACTAGAGAGTAGAAACATCGAGGAAAATAGTGCCTTAATTGATGTGAAAAGCCATAACAACCACTTCACTAATAGTTGCTTCAATAACATTAATCGTATTCAAAGCTCCAAAGTAGAGGACTTGTTTGGGTTTGGAAATCATGGGCATAGGGTGGAAAACTTAACAATGGGAGAATGGGATTTGGAGTGTTTGATGCAAGATATATTCTCTTTTCCTTTCCTTGATTTCCAAGTTGATCAATAA 960 0.3812 MRKPDMMGKDNIKSKLRKGLWSPEEDEKLIRHMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIQLHSLLGNRWSKIAAHLSRRTDNEIKNFWNSTLKKKMKMNTSTTSPNNSNESYEPNDILGGIMPINEHDLITMCMDCSTSTSSSSMQSMVSADQFDPFSMLIKNNHYDMTNVSAGFHEIAPCMNQVGMVERHHGNYGILEPNNKMGLLEREFSLPTLESRNIEENSALIDVKSHNNHFTNSCFNNINRIQSSKVEDLFGFGNHGHRVENLTMGEWDLECLMQDIFSFPFLDFQVDQ* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0713 319 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lan13g0713 319 Gene3D - 72 140 - -
Lan13g0713 319 CDD SANT 73 116 IPR001005 -
Lan13g0713 319 Pfam Myb-like DNA-binding domain 71 115 IPR001005 -
Lan13g0713 319 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Lan13g0713 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Lan13g0713 319 CDD SANT 21 65 IPR001005 -
Lan13g0713 319 PANTHER MYB DOMAIN PROTEIN 55 9 317 - -
Lan13g0713 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Lan13g0713 319 PANTHER TRANSCRIPTION FACTOR MYB83 9 317 - -
Lan13g0713 319 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Lan13g0713 319 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Lan13g0713 319 SMART sant 70 118 IPR001005 -
Lan13g0713 319 SMART sant 17 67 IPR001005 -
Lan13g0713 319 Gene3D - 15 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0713 Lan-Chr13 6936976 6939136 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan13g0713 Myb_DNA-binding 2.9e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0894 7 8171693 8174480 Lan13g0713 13 6936976 6939136 LSH