Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0711 ATGAAGTCAAAAGGGGAAGCTGGGGCAAAGGCAATCACGGCATTGGGTGGCCAAGTCTGCCAGATATGTAGTGACAATGTTGGGAAGACTGTGGATGGTGATGAACCATTCGTTGCGTGCGATGTTTGTGCTTTCCCTGTCTGCAGGCCTTGCTATGAGTACGAAAGGAAGGATGGGAAGCAGTCTTGCCCCCAGTGCAAAACACGGTACAAGAGGCATAAAGGAAGTCCTGCAATTCTTGGAGACGAGGAAGATTACAGTGCTGATGGTGGTGCTAGTGACTTCAATTACGATTCAGAAAAGCAGAAAATTTCAGAGCGCATGTTGAGCTGGCACATGACCTACCGTCGAACAGAGGAGGTTGGTGCTCCAAATTATGACAAGGAAGTTTCTCACAATCACATTCCTCATCTCACCAGTGGACAAGAGCTGTCTGGAGAGTTAAGTGCAGCCTCACCTGAGCGACTCTCAATGGCATCTCCTGAAGTTGGTGATGGGAAGCGTGATAATCTTCCATATTCATCCAATGTTAATCAAACTTCAAATATTAGGGTTGTGGATTCAGGATTGGGAAATGTAGCATGGAAAGAAAGGGTTGATGTCTGGAAGGTGAAGCAAGAGAAGAATGTTGTTCCAATGAGCACAGTCCAAGCTGGTTCCGAAAGAGGAGCTGGAGATATCGATGCCTGTACTGATGTGCTTGTGGATGATTCCTTGTTGAATGATGAAGCTCGGCAACCTCTTTCTAGGAAGGTTTCTATTCCATCATCTAGGATCAATCCATATAGACTGGTCATTGTTCTGAGGCTGGTTGTTCTGTGCATTTTCTTGCATTATCGAATAACAAATCCAGTGCCCAATGCATATCCAGTGTGGCTGGTATCAGTTATATGTGAGATTTGGTTCGCTTTATCTTGGATATTGGATCAATTCCCCAAGTGGCTTCCGGTAAACCGTGAAACATATCTTGACCGACTTTTGCTGAGATACGACCGGGAAGGAGAACCATCGCAGCTAGCAGCTGTCGACATTTTTGTCAGTACTGTTGATCCATTAAAGGAGCCCCCACTTGTAACTGCCAATACCGTGCTATCTATTCTTGCTGTTGACTACCCCGTGGATAAGGTCTCCTGCTATGTCTCTGATGATGGTGCTGCTATGTTAACATTTGAAGCACTTGCCGAGACATCAGAATTTGCAAGGAAATGGGTTCCTTTCTGCAAGAAGTTTAACATTGAACCACGTGCACCTGAGTGGTACTTTGCACAGAAGATTGACTACTTGAAAGATAAGGTTCAACCATCATTTGTCAAGGATCGTCGAGCAATGAAGAGAGAATATGAAGAATTTAAAATTCGTATTAATGTACTTGTTGCAAAGGCAACAAAAGTTCCAGAAGAAGGGTGGGTGATGCAAGATGGTACACCATGGCCTGGGAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGTCAAAGTGGAGGAGTTGACTCTGATGGTAATGAACTTCCTCGTTTAGTGTATGTTTCTCGTGAAAAGCGTCCAGGGTTCCAACATCACAAGAAAGCTGGTGCCATGAATGCACTTGTCCGTGTATCTGCCGTCCTTACTAATGGACCCTTTTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCTTTGAGGGAAGCTATGTGTTTTATGATGGACCCCAACCTTGGGAAACATGTTTGTTTTGTCCAGTTTCCACAGAGGTTTGACGCTATTGATAAGAATGATCGATATGCAAATCGTAATACTGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCAGTTTACGTGGGTACTGGTTGTGTCTTCAATAGGACAGCTTTATATGGTTATGAACCTCCTCTTAAACCGAAGCATAAAAAGCCCGGGTTGCTATCTTCGTTCTGTGGTGGAAATCGGAAGAAGAGTTCAAAGTCTAGTAAGAAAGGATCAGATAAGAAAAAATATAGCAAGCATGTTGACCAAACTGTGCCTATCTCTTCCTTAGAGGATATAGAAGAAGGAATAGAAGGTACCGGATTTGACGATGAGAAATCACTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCTGTTGTTTTTGTTGCATCTACCCTTATGGAGAATGGTGGTGTTCCTCAGTCTGCGACTCCAGAGACTCTTCTTAAGGAGGCTATTCATGTTATTAGCTGTGGATATGAAGATAGAACAGAGTGGGGAACTGAGATAGGATGGATATATGGTTCTGTCACAGAAGATATTCTGACTGGATTTAAGATGCATGCTCGTGGTTGGCGATCTATATACTGCATGCCTAAGCGCCCGGCATTTAAAGGTTCTGCTCCTATCAATCTTTCCGATCGTCTGAACCAAGTGCTTCGGTGGGCTTTAGGTTCTGTGGAAATTCTCTTTAGTCGACATTGCCCTATCTGGTATGGTTATGGTGGAAGGCTAAAGTGGCTCGAAAGGTTCGCATATGTGAACACCACAATCTATCCGGTTACTGCCATTCCTCTTCTCATGTATTGTACCTTGCCCGCTGTCTGTCTGCTAACTAACAAGTTTATCATTCCCCAGATTAGTAACCTTGCAAGTATATGGTTCATCTCTCTCTTTCTTTCCATCTTCGCAACGGGAATCCTCGAAATGAGGTGGAGTGGTGTTGGAATTGAGGAGTGGTGGAGGAACGAACAGTTTTGGGTTATCGGCGGTGTCTCAGCACATCTTTTCGCTGTATTCCAAGGTTTACTCAAAGTGCTTGCTGGAATTGACACCAACTTCACTGTCACATCCAAGGCATCAGATGAAGATGGAGACTTTGCAGAACTCTACATGATCAAATGGACAACACTTCTCGTTCCACCCACAACACTTCTCATCATAAACTTGGTAGGGGTTATTGCAGGCATATCCTATGCCATTAACAGTGGTTATCAATCATGGGGTCCTCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTTATCATCCATCTTTATCCATTCCTCAAAGGTCTCATGGGACGCCAGAATCGAACGCCGACCATCGTGGTGGTCTGGTCCATTCTTCTTGCATCCATTTTTTCACTCTTATGGGTCCGAGTGGATCCGTTTATTACAAGAGTCACTGGTCCTAATGTTGAGGAGTGTGGAATTAACTGCTAG 3213 0.4388 MKSKGEAGAKAITALGGQVCQICSDNVGKTVDGDEPFVACDVCAFPVCRPCYEYERKDGKQSCPQCKTRYKRHKGSPAILGDEEDYSADGGASDFNYDSEKQKISERMLSWHMTYRRTEEVGAPNYDKEVSHNHIPHLTSGQELSGELSAASPERLSMASPEVGDGKRDNLPYSSNVNQTSNIRVVDSGLGNVAWKERVDVWKVKQEKNVVPMSTVQAGSERGAGDIDACTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRLVIVLRLVVLCIFLHYRITNPVPNAYPVWLVSVICEIWFALSWILDQFPKWLPVNRETYLDRLLLRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKFNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINVLVAKATKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGVDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCFVQFPQRFDAIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSFCGGNRKKSSKSSKKGSDKKKYSKHVDQTVPISSLEDIEEGIEGTGFDDEKSLLMSQMSLEKRFGQSVVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDRTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPVTAIPLLMYCTLPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIEEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMIKWTTLLVPPTTLLIINLVGVIAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFITRVTGPNVEECGINC* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0711 1070 Pfam Zinc-binding RING-finger 11 85 IPR027934 -
Lan13g0711 1070 MobiDBLite consensus disorder prediction 139 175 - -
Lan13g0711 1070 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 466 633 IPR029044 -
Lan13g0711 1070 SUPERFAMILY Nucleotide-diphospho-sugar transferases 356 881 IPR029044 -
Lan13g0711 1070 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Lan13g0711 1070 Pfam Cellulose synthase 342 1063 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lan13g0711 1070 PANTHER CELLULOSE SYNTHASE 5 1070 - -
Lan13g0711 1070 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1070 - -
Lan13g0711 1070 MobiDBLite consensus disorder prediction 643 673 - -
Lan13g0711 1070 CDD mRING-HC-C4C4_CesA_plant 18 69 - -
Lan13g0711 1070 SUPERFAMILY RING/U-box 7 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0711 Lan-Chr13 6859697 6867684 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0711 13 6859697 6867684 Lan4g1255 4 20940223 20947992 PCT