Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0710 ATGTACATCAAGGAAATATGCTTGGAGGGTTTCAAATCCTACGCCACCAGAACCATAGTTCCGGGCTTCGATCGATTCTTCAACGCAATCACCGGCTTGAACGGTTCTGGAAAATCGAACATTCTCGATTCAATTTGCTTTGTTTTGGGAATTACCAATTTGCAGCAGGTTAGGGCTTCCAATCTTCAGGAACTTGTGTATAAACAAGGTCAAGCAGGAATAACCAAAGCTACGGTTTCGATTGTGTTTGATAACTCTGATAGGAATCGTAGCCCTCTTGGTTATGAAGATCATTCTGAGATTACAGTTACAAGACAGATTGTGGTTGGAGGAAGGAACAAATATCTGATCAATGGAAAACTTGCACAGCCAAGTCAAGTTCAAAACCTTTTTCATTCTGTGCAGCTAAATGTGAATAACCCACATTTTCTTATAATGCAAGGGCGAATCACTAAGGTTTTAAATATGAAACCACCAGAGATATTGTCTATGCTCGAGGAAGCTGCAGGGACAAGAATGTATGAGACAAAGAAAGAGGCTGCTCTAAAAACACTTGAGAAGAAGCAGAGCAAGGTTGAGGAGATTAACAAGCTTCTTGACCAGGAGATATTGCCTGCTCTGGAGAAGCTAAGGAAAGAAAGGACACAGTACATGCAATGGGCTAATGGCAATGCTGAGTTAGATAGGCTAAGAAGATTTTGCATAGCTTATGAGTATGTTCAAGCAGAGAGGATTAAAGACAATGCGATATCTGAGGTGGAACAAGTTAAAGCTAAGATAGCTGAGATTGATGATACTGCTAATACAACTCAGGTGGAAGTAAAGGAAATGGAGAACAAAGTATCTCAGTTGACTGCTGCAAAGGAAGCAAGCATGGGTGAAGAACTGAAGCCTTTGTCAGAGAAGGTTGATAAACTTTCGCAGAATCTTGTGAAGGAAACATCTATACTAAATAATAAAGAAGACACACTGAAGAGTGAAGAAGCCAACAAAAAGAATATTGCCAAAAATATTGAGGAACTGAAGCAATCTGTAGAAGAGAAGGCCTCTGCTGTTAAAATGGCTGAAGAGGGAGCTGCTGATCTGAAAAAGAAAGTTGACGAGCTCTCAAAGAGTCTAGAAGAGCACGAAAAGGACTATCAGGGTGTTTTAGCCGGGAAGAGCAGTGGTGATGAGGAGAAATGTTTAGAGGACCAACTAGGCGATGCGAAGGTAGATGTTGGGAGTGCTGAAACAGAGTTGAAACAGCTGAAAACCAAAATTAACCATTGTGAAAAGGAACTCAAAGAGAAAACGAAGCAATTAAGGTCAAAACGTGAAGAAGCTATTTCTGTAGAAAATGAGCTAAATGCCAGACAGAAAGATGTTGAAAATGTCAAAAAGGAATTAGAGTCTCTTCCTTATAAAGAGGGTGAGATGGAAGCTTTGCAAAAGGACCGTTCATCTGAGCTGGAATGTGTGCAGAAGTGGAAGGATGAGATACGTAATGTTTCAGCATACTTAGCAAATGTTGAATTTACATATCGTGATCCTGTCAAGAACTTTGATAGGTCTAAGGTGAAAGGTGTTGTTGCAAGACTCATCAAAGTAAAGGATCCATCCACAATGACTGCCCTAGAGGTTACAGCCGGTGGAAAGTTGTTTAATGTTGTTGTGGACACAGAAAGTACTGGAAAACAACTACTACAGAATGGTAATCTTAGAAGAAGAGTGACAATAATACCTTTGAACAAAATACAATCCTATGCTGTTCCATCTAGAGCTCAACAAGCTGCTGTTAGATTGGTTGGCAAGGAGAATGCTGAAGTAGCACTTTCTTTGGTTGGTTATGAAAAAGAATTGAGGAATGCAATGGAATATGTATTTGGTTCAACTTTTGTTTGCAAAACCATTGATGCTGCTAAAGAGGTGGCATTCAATAGGGAGGTTCACACCACAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTCTGACTGGTGGAAGCCGGAAGGGAAGTGGTGATCTTTTGAAGCATCTTCATGATTTGGCTGAGGCCGAGTCAAAACTTTTGGTGCATCAGAGAAGGTTATCAGAAATTGAGGCAAAGATTACAAAGCTCCGTCCTCTTCAGGAGAAATTTAAAGACCTCAAAGCACAGTTAGAACTCAAGTCATATGATCTTTCATTGTTTCAGAGTAGAGCTGAGCAAAATGAGCATCACAAGCTTGGGGAATTAGTGAAGAAGATTGAGCAAGAGCTTGAAGAAGCAAAATCTGCAATCAAGGAAAAACAAGTCCTGTATGAAGATTGCGTCAAGACTGTTAAATCACTTGAGAAATCAATCAAAGACCATGATAATAATCGAGAGACTAGGCTAAAAGACTTGGACAAAAAGATAAAGTCCATCAAGTCACAAATGCAGTCATCTTCAAAAGATCTGAAGGGACATGATAATGAAAAGGAGAGGCTTGTAATGGAAATGGAAGCTGTTGTCAAGGAGCAAGGTTCCTTGGAGAATCAATTAGCTTCGTTGGGAACACAGATTAGTGATCTTGCCTCAGAAGTAGAGGAACAAAGAGCCAAGGTTGTCTCTGCAAGGAATGAACTCGATCAAGTTCAGTCACAGATGAATTCAGTTCGCCAGAAAATGAAGGACTGTGACAAGGAAATCAGTGGTATTATTAAGGAGCAGCAAAAGCTTGAACACAAACTTACTGAGGGTAATCTCGAACGGAAGAGGATGGAAAATGAGGTAAAACGGATGGAGATGGAACAGAAAGACTGTTCTACAAGAGTGGATAAATTGGTAGAGAAGCATGCATGGATTGCTACCGAAAAACAGTTTTTTGGTAAAAGTGGGACTGATTATGATTTCTCTTCCCGAAATCCTGGTAAAGCAATGGAAGAACTTGAGAGGCTTCAGGCTGAACAATCTGGGCTTGAGAAAAGGGTCAATAAGAAAGTAATGGCAATGTTTGAAAAGGCAGAAGATGAGTACAATGACTTGATGTCCAAGAAAAACATAATTGAGAATGACAAGTCTAAAATCAAGAAGGTGATCGAAGAGTTAGATGAGAAGAAGAAGGAGACACTAAATGTTACCTGGACCAAAGTGAACAGTGACTTTGGATCCATCTTTTCTACACTATTACCAGGCACAATGGCTAAGTTAGAACCTCCAGAAGGATGCAGTTTTCTTGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTGTGGAAACAGTCATTGTCTGAACTGAGTGGAGGTCAGCGATCACTGCTTGCACTTTCGCTGATTCTGGCACTTCTTCTATTCAAACCTGCTCCACTTTACATCCTTGACGAGGTTGATGCAGCTCTTGATTTGAGTCACACACAAAACATAGGGAGAATGATAAAGGCTCACTTTCCACACTCCCAGTTTATTGTGGTTTCACTAAAGGAGGGCATGTTCAATAATGCAAATGTTCTTTTCCGGACAAAATTTGTAGATGGTGTTTCTACTGTTCAGAGAACTGTTGCTAAGCAAAGCAAGTGA 3528 0.4036 MYIKEICLEGFKSYATRTIVPGFDRFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIVFDNSDRNRSPLGYEDHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVEEINKLLDQEILPALEKLRKERTQYMQWANGNAELDRLRRFCIAYEYVQAERIKDNAISEVEQVKAKIAEIDDTANTTQVEVKEMENKVSQLTAAKEASMGEELKPLSEKVDKLSQNLVKETSILNNKEDTLKSEEANKKNIAKNIEELKQSVEEKASAVKMAEEGAADLKKKVDELSKSLEEHEKDYQGVLAGKSSGDEEKCLEDQLGDAKVDVGSAETELKQLKTKINHCEKELKEKTKQLRSKREEAISVENELNARQKDVENVKKELESLPYKEGEMEALQKDRSSELECVQKWKDEIRNVSAYLANVEFTYRDPVKNFDRSKVKGVVARLIKVKDPSTMTALEVTAGGKLFNVVVDTESTGKQLLQNGNLRRRVTIIPLNKIQSYAVPSRAQQAAVRLVGKENAEVALSLVGYEKELRNAMEYVFGSTFVCKTIDAAKEVAFNREVHTTSVTLEGDIFQPSGLLTGGSRKGSGDLLKHLHDLAEAESKLLVHQRRLSEIEAKITKLRPLQEKFKDLKAQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELEEAKSAIKEKQVLYEDCVKTVKSLEKSIKDHDNNRETRLKDLDKKIKSIKSQMQSSSKDLKGHDNEKERLVMEMEAVVKEQGSLENQLASLGTQISDLASEVEEQRAKVVSARNELDQVQSQMNSVRQKMKDCDKEISGIIKEQQKLEHKLTEGNLERKRMENEVKRMEMEQKDCSTRVDKLVEKHAWIATEKQFFGKSGTDYDFSSRNPGKAMEELERLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWTKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAKQSK* 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0710 1175 Coils Coil 239 294 - -
Lan13g0710 1175 SUPERFAMILY Smc hinge domain 487 685 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lan13g0710 1175 Gene3D - 787 944 - -
Lan13g0710 1175 Coils Coil 982 1026 - -
Lan13g0710 1175 PIRSF SMC 1 1155 IPR024704 GO:0005524|GO:0016887
Lan13g0710 1175 Pfam RecF/RecN/SMC N terminal domain 2 1161 IPR003395 -
Lan13g0710 1175 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2-2 1 1174 - -
Lan13g0710 1175 Coils Coil 178 202 - -
Lan13g0710 1175 Coils Coil 894 928 - -
Lan13g0710 1175 Gene3D - 1 202 IPR027417 -
Lan13g0710 1175 Coils Coil 317 379 - -
Lan13g0710 1175 Coils Coil 679 699 - -
Lan13g0710 1175 Coils Coil 838 886 - -
Lan13g0710 1175 Coils Coil 789 809 - -
Lan13g0710 1175 Gene3D - 591 666 - -
Lan13g0710 1175 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lan13g0710 1175 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 1 1174 - -
Lan13g0710 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1152 IPR027417 -
Lan13g0710 1175 Coils Coil 400 466 - -
Lan13g0710 1175 Coils Coil 736 766 - -
Lan13g0710 1175 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Lan13g0710 1175 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lan13g0710 1175 Gene3D - 994 1175 IPR027417 -
Lan13g0710 1175 Gene3D - 424 590 - -
Lan13g0710 1175 SUPERFAMILY Tropomyosin 683 888 - -
Lan13g0710 1175 SUPERFAMILY Tropomyosin 297 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0710 Lan-Chr13 6847337 6856514 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0903 7 8283074 8292793 Lan13g0710 13 6847337 6856514 LSH