Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0707 ATGGGGAAGATAGGAAAAAAACACAACTTTTCGGTGCGCTTTCTATCCTCCTTGTCATCTTTCAAGATGGTTATCCTCCTGGCCATTTTTCTCTTGACCTTTTCCTTTCCTGCATATTCATCTTTTACTCCTAAAGATAGCATACTCATTGATTGCGGTGCCGAAAATGCACCTACTCTTCCTGATGGAAGACAATTCAAATCAGACCCTCAAGCTAATTCTTTCTTACAAGCCAATGATGACTATAAGGTTTCAGCTGAAGATGATCCTAGTCTTCCTTCACCTATATACAAGACTGCAAGGATTTTCATTCAGGAAGCTAAGTATTCCTTCCATTTGGCTGAGCCGGGATATCATTGGATTCGGCTTCATTTTTATCCGATAAAAAACAATGTATTTGATCTTCAGAAGGCCACTTTCTCTGTTAACACAAATGCATATGTGCTTCTTCATAGTTTCAATGTTAATAACAATGACAAGCCAATACTAAAGGAGTACCTCATCAATGCAAATGAATCACAATTCACCTTGGTCTTCATTCCCTTGAAGAACTCTGCTGCATTTATCAATGCCATTGAGGTTGTTTCAGCTCCTGGTAACCTTATCTTTGACACCGCGGCTGCCCTTTTCCCAGTCGGCGACTTCTCTAGCCTAACGAGTTATGGTATCCAACCTGTTTATAGGCTCAACAATGGAGGACCCTTGATCACCTCATCAAATGACACCCTTGGAAGAATTTGGGAATCTGATGAGCCTTTCCTCACAAACAAGAACTTGGCAAAAAGTGTCTCGATCGCCACAAACGCAATTAAGTTCCCTATTGACACACCAACAATTTCTCCTCTTATTGCACCACAATCTGTGTATGCTTCTGCCACTGAGATGGGTGATGCTGGTGTTAATCAGCCAAACTTCAATGTGTCATGGAAATTTGATGTAGACACTTCTTTTAGCTACCTTGTTAGATTGCATTTCTGTGACATTGTCAGCAAAGGGCTTAATGAACTCTACTTCAATGTCTATGTCAATGGGAAAATGGCAATTTCTAACTTGGACTTATCGGCTATTACCGGTGCCTTGTCAACACCGTATTACAAAGACATTGTGGTTAATGCAACATTGATGACTGAGGGACTATCAGTTCAGGTTGGGCCAGCAAAGGCTGAGGGTGGAAATGCCAATGCCATTGTGAATGGTATAGAGGTGATGAAGTTGAGCAACTCAGTGGATAGTTTGGATGGAGAATTTGGTGTTGATGGAAGAAAGATCGGTGGTTCGAACCGTGGGACAGTTGCAGCTGTTGGATTTGCCATGATGTTTGGAGCATTTGTTGGTCTTGGTGCCATGGTGATCAAGTGGCACAAGAGGCCTCAGGATTGGCAAAAGAGGAATAGCTTTTCTTCATGGTTACTTCCTCTACATGCCGGTGATACAAGCTTTAGTAGCAGCAAGGGTAACATGTACTCATCAACAATGGGATTAGGAAGGTATTTTTCCTTTGCAGAGTTGCAGGAAGCAACCAAGAACTTTGATTCCAAGGCCATTATCGGTGTTGGTGGATTCGGCAATGTGTATTTGGGTGTGATTGATGAGGGGACTAAAGTGGCTGTCAAGAGAGGAAATCCACAGTCAGAACAAGGTATAACAGAATTCCAGACAGAAATTCAAATGTTGTCCAAGCTTAGACATAGACATTTGGTGTCCTTGATCGGATATTGTGATGAGAATGAAGAGATGATCCTGGTTTATGAGTACATGCCTAATGGACATTTCAGAGACCATCTTTATGGGAAGAATTTGCCGGTTCTTTCTTGGAAGCAAAGGTTAGAGGTCTGTATTGGATCGGCTCGTGGCCTTCACTACCTTCACACTGGAACAGCACAAGGTATCATTCATCGCGATGTCAAGACCACCAACATTTTGATTGATGAAAACTTCACGGCCAAGGTATCCGATTTTGGACTTTCAAAGGATGCACCTATGGGCCAAGGTCATGTTAGCACAGCAGTGAAGGGTAGCTTTGGTTATCTTGACCCTGAGTACTTCAGGAGGCAGCAATTGACAGAAAAATCGGATGTCTACTCATTCGGTGTGGTCCTTCTCGAGGCACTATGTGCAAGGCCAGCCATTAACCCTCAGTTGCCCCGCGAACAAGTAAACTTGGCCGATTGGGCAATGCAATGGAAGAGGAAGGGCTTGCTTGACAAAATTATTGACCCTCTTCTTATTGGTAACATCAATCCCGAATCAATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGGCTGATTATGGAGTTGATAGGCCTTCAATGGGAGATGTGTTATGGAACTTGGAGTATGCATTGCAGCTTCAAGAAGCTTTCACACAAGGAAAAACTGAGGATGAGAATGAGGCCAATTCCTCACCTGCTTCCACACCTTCCATCAACTCAGAAGACCATGACACATCACCACCACCACCACTACCACCAGCTGCGACTACTACTCCGCAACCAGAAGTAAATAACAACCATTCAGCACAAGTACCACACACTATTGATGACCATTCTGGAACTGCAATGTTTGCACAGTTCACTGATCTTAATGGCAGGTGA 2598 0.4319 MGKIGKKHNFSVRFLSSLSSFKMVILLAIFLLTFSFPAYSSFTPKDSILIDCGAENAPTLPDGRQFKSDPQANSFLQANDDYKVSAEDDPSLPSPIYKTARIFIQEAKYSFHLAEPGYHWIRLHFYPIKNNVFDLQKATFSVNTNAYVLLHSFNVNNNDKPILKEYLINANESQFTLVFIPLKNSAAFINAIEVVSAPGNLIFDTAAALFPVGDFSSLTSYGIQPVYRLNNGGPLITSSNDTLGRIWESDEPFLTNKNLAKSVSIATNAIKFPIDTPTISPLIAPQSVYASATEMGDAGVNQPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYVNGKMAISNLDLSAITGALSTPYYKDIVVNATLMTEGLSVQVGPAKAEGGNANAIVNGIEVMKLSNSVDSLDGEFGVDGRKIGGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFSSSKGNMYSSTMGLGRYFSFAELQEATKNFDSKAIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENEEMILVYEYMPNGHFRDHLYGKNLPVLSWKQRLEVCIGSARGLHYLHTGTAQGIIHRDVKTTNILIDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLIGNINPESMKKFAEAAEKCLADYGVDRPSMGDVLWNLEYALQLQEAFTQGKTEDENEANSSPASTPSINSEDHDTSPPPPLPPAATTTPQPEVNNNHSAQVPHTIDDHSGTAMFAQFTDLNGR* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0707 865 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Lan13g0707 865 SMART serkin_6 510 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0707 865 Gene3D - 223 407 - -
Lan13g0707 865 Gene3D - 47 198 - -
Lan13g0707 865 MobiDBLite consensus disorder prediction 790 852 - -
Lan13g0707 865 Gene3D Transferase(Phosphotransferase) domain 1 586 806 - -
Lan13g0707 865 Pfam Malectin-like domain 50 404 IPR024788 -
Lan13g0707 865 SUPERFAMILY Protein kinase-like (PK-like) 493 777 IPR011009 -
Lan13g0707 865 MobiDBLite consensus disorder prediction 790 814 - -
Lan13g0707 865 Pfam Protein tyrosine and serine/threonine kinase 514 706 IPR001245 GO:0004672|GO:0006468
Lan13g0707 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Lan13g0707 865 MobiDBLite consensus disorder prediction 830 847 - -
Lan13g0707 865 ProSiteProfiles Protein kinase domain profile. 510 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0707 865 PANTHER OS07G0166700 PROTEIN 32 839 IPR045272 GO:0004714|GO:0006468
Lan13g0707 865 CDD STKc_IRAK 516 780 - -
Lan13g0707 865 Gene3D Phosphorylase Kinase; domain 1 478 585 - -
Lan13g0707 865 PANTHER BNAC03G60370D PROTEIN 32 839 - -
Lan13g0707 865 MobiDBLite consensus disorder prediction 815 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0707 Lan-Chr13 6776595 6779641 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan13g0707 Malectin_like 1.3e-39 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0963 7 9448759 9458357 Lan13g0707 13 6776595 6779641 LSH
Lan7g0773 7 6797638 6800717 Lan13g0707 13 6776595 6779641 LSH
Lan8g1270 8 19173190 19176368 Lan13g0707 13 6776595 6779641 LSH
Lan13g0707 13 6776595 6779641 Lan4g1849 4 26982123 26984975 PCT
Lan4g1849 4 26982123 26984975 Lan13g0707 13 6776595 6779641 PCT