Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0706 ATGGGTGCTGCTTGCTGTGTTGCAGCCAAAGATAAAACTGTACAAAATGGATCTACCCGTGAAATCTTACATCGGAACATTCTGTGTTCTCCAACATGGAGCTTCCGGTGGGATCATCGAGGTCGCATTGCTGGTGAAGATGCTTCTATAACATGGTTTTCTGATGGTATTAGCAGGAACGATGGATCAGAGAATAAAAATGAAATACCATATGTATCAGAGGACGGAAGCCCATTGCAGAGTGATCAAAGGAATATATGCCAAAAGTACCCAATTTCTGAAAGAAGTGCTGCGCTTGTAATAAATTCTACTTCGGATCAATCAATTTCTACGAATGTCTCCATGGATGTGAATGTGGAACAGGTGAAGGAGCTGGAAGAGTCATCAACAATATCATGTCCATCTCCCACAATACCTTCATCCTCATTGCCTTCTACTTTGCTGCTGGCCTCTCCTCTGCCATCCCAAAGTCACATTGCTCCCTCCAGCTCAACCCCAGCAAGGTGGCCCTACCATTCCCCAGGACATCAACTATCACGGCAAGTTTCTGACAGCCGACTCCCAGGATTCAAGTCACCAAGCAGCTTTTATGTGTCTGAAGAAAAGCAAGTGTTTCCTTCATGGAGCAATGAATCAGATATGCGCTCTCGTGGTGGATCTTCAGATGGTTGGTCTGTGCCTGACTTTTCTGAGCTGATGGGAATTTCCAATAGAGAAAGACGGTCGTTTGATAATGAAACATTTGGTTTTAATCGTGAAAGGTTACTTAGATCAAGTAGTCGGTTTTCAACATCTCCAGTTGATTTGCAAACATGTTCTGTGTGCTCAAAACTACTAACTGAGAAATCTTCTTGGAGCTCCCAAAAGATAATTGCAGGCAATGACCTTGCTGTAGTTTCTGTTCTTATCTGTGGCCATGTGTATCATGCTGAATGTTTGGAGAGTATGACACCTGAAATCAATAAGTATGATCCAGCTTGCCCAGTTTGCACTTTTGGTGAGAAACAAACTCGTAAATTGTCCGAAAAAGCTCTGAAAGCTGAAATGGATCTAAAGGCTAGAAACAAGAAATCAAAGAACCGAATTATAGACAGTGAAATTGATGATCATTTTGTGATTGATCACTTTAAAGATGGAGGGCGACAAGGTAAAGTTCTTAGGATGTACTCTAGTTCCAGTGGGAAAATATCCTTTGGAAAACATTTTCTGAGGAGACACTTCTCATTTCGCTCAAAGAGTTCCAAATCCATGTTAGGTGATCACTCTACAAGAAAGAAGGGATTTTTTTGGGCGAAATCTAGCAAACAATAA 1311 0.4172 MGAACCVAAKDKTVQNGSTREILHRNILCSPTWSFRWDHRGRIAGEDASITWFSDGISRNDGSENKNEIPYVSEDGSPLQSDQRNICQKYPISERSAALVINSTSDQSISTNVSMDVNVEQVKELEESSTISCPSPTIPSSSLPSTLLLASPLPSQSHIAPSSSTPARWPYHSPGHQLSRQVSDSRLPGFKSPSSFYVSEEKQVFPSWSNESDMRSRGGSSDGWSVPDFSELMGISNRERRSFDNETFGFNRERLLRSSSRFSTSPVDLQTCSVCSKLLTEKSSWSSQKIIAGNDLAVVSVLICGHVYHAECLESMTPEINKYDPACPVCTFGEKQTRKLSEKALKAEMDLKARNKKSKNRIIDSEIDDHFVIDHFKDGGRQGKVLRMYSSSSGKISFGKHFLRRHFSFRSKSSKSMLGDHSTRKKGFFWAKSSKQ* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0706 436 SUPERFAMILY RING/U-box 271 331 - -
Lan13g0706 436 MobiDBLite consensus disorder prediction 154 185 - -
Lan13g0706 436 CDD RING-H2 272 330 - -
Lan13g0706 436 SMART ring_2 272 330 IPR001841 -
Lan13g0706 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 332 IPR013083 -
Lan13g0706 436 PANTHER BNAA09G43140D PROTEIN 1 431 - -
Lan13g0706 436 ProSiteProfiles Zinc finger RING-type profile. 272 331 IPR001841 -
Lan13g0706 436 PANTHER EXPRESSED PROTEIN 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0706 Lan-Chr13 6769759 6775103 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0772 7 6790168 6795758 Lan13g0706 13 6769759 6775103 LSH
Lan8g1271 8 19177235 19185016 Lan13g0706 13 6769759 6775103 LSH