Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0703 ATGGCTTCACTGAAAGTGCCTGAGATTGTTCCTTCTCCTACCCATGACAGTGAACGAATTAGAAAAGCTTTCCAAGGATTGGGCACAGATGAAAAGGATTTAATCTTGGTATTAGGACACAGGAATTCAAAACAATTGAAGGAAATCAGAGAAACTTATCAGCAGCTTTACAATGAATCTCTCATTGATCGTCTCCATTCTGAACTCTCTGGTGATTTTAGAAATGCTATAATTCTCTGGACTGAAGATCCAGCAGAAAGGGATGCAAAACTTGCAAATGCTGGATTGAAGGCCAAGAGAAAGGGAATTAAAGAGCTACAGATTCTGGTTGAAATAGCATGTGCATCAAATCCAAACCATTTGGTGGCTGTAAGGAAGGCTTATTGCTCTCTCTTTCATTGCTCTCTTGAGGAAGACATTGTAGCTTCTGTTTCTCAGCCCCTCAGGAAGGTTTTGTTGGGGCTAGTGAGCTCTTATAGGTATGACAAAGTGACTGTAAATTTGGAGGTTGCCAAGTGGGAATCAACAAAGCTATATGAAGCCATCAACACTAAGAAATTAGATGATGATCACATTATCTGGATACTTAGCACTAGGAATATTTTCCAGCTCAGGGAAACTTTTGCAAGCTACAAGCATCTCTATGGGAATACATTGGAACAGGGCATAAAAAATTGTGGTAAGGGTGATATGGAATCTCTCTTAAATGTGGTAGTATGGTGCATAAACAGCCCAGAGAAACATTTTGCAAAGGTTGTAAGAGAATCTATTATTGGACTTGGAACTGATGAAGATTCCCTGAATAGAGGTATTGTAACTAGAGCTCAAATCGACCTGTTGAAAATCAGATTCGAATACGCTAACATGTACAAATCTAGTCTTGATGATGATGTGATTGGAGATACCTCAGGAGAGTACAAAGATTTTTTGTTGACTTTGCTAGGGAAAGGTCCAAAAGGATTATGA 966 0.3913 MASLKVPEIVPSPTHDSERIRKAFQGLGTDEKDLILVLGHRNSKQLKEIRETYQQLYNESLIDRLHSELSGDFRNAIILWTEDPAERDAKLANAGLKAKRKGIKELQILVEIACASNPNHLVAVRKAYCSLFHCSLEEDIVASVSQPLRKVLLGLVSSYRYDKVTVNLEVAKWESTKLYEAINTKKLDDDHIIWILSTRNIFQLRETFASYKHLYGNTLEQGIKNCGKGDMESLLNVVVWCINSPEKHFAKVVRESIIGLGTDEDSLNRGIVTRAQIDLLKIRFEYANMYKSSLDDDVIGDTSGEYKDFLLTLLGKGPKGL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0703 321 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Lan13g0703 321 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Lan13g0703 321 PRINTS Annexin family signature 257 277 IPR001464 GO:0005509|GO:0005544
Lan13g0703 321 PRINTS Annexin family signature 301 314 IPR001464 GO:0005509|GO:0005544
Lan13g0703 321 Pfam Annexin 249 313 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 Pfam Annexin 16 78 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 Pfam Annexin 177 235 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 Pfam Annexin 99 155 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 Gene3D Annexin 83 156 IPR037104 GO:0005509|GO:0005544
Lan13g0703 321 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 ProSitePatterns Annexin repeat signature. 261 313 IPR018252 GO:0005509|GO:0005544
Lan13g0703 321 Gene3D Annexin 168 243 IPR037104 GO:0005509|GO:0005544
Lan13g0703 321 Gene3D Annexin 245 316 IPR037104 GO:0005509|GO:0005544
Lan13g0703 321 SMART annex3 188 238 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 SMART annex3 261 313 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 SMART annex3 107 155 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 ProSiteProfiles Annexin repeat profile. 165 240 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 PANTHER ANNEXIN D3 7 316 - -
Lan13g0703 321 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Lan13g0703 321 PANTHER ANNEXIN 7 316 - -
Lan13g0703 321 ProSiteProfiles Annexin repeat profile. 244 315 IPR018502 GO:0005509|GO:0005544
Lan13g0703 321 SUPERFAMILY Annexin 2 315 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0703 Lan-Chr13 6749219 6752997 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0766 7 6667777 6670257 Lan13g0703 13 6749219 6752997 LSH
Lan8g1275 8 19234166 19236138 Lan13g0703 13 6749219 6752997 LSH