Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0695 ATGAACATGGCATCGAATAGTCCATTATTTGACGATATACGCATCCATTCTGATATTGATCCCCCTCAAATTGAAGAGTTGACAGATGTTAGTGAATTAGTGAATGATCCTACACAAACTGCTCATAAACCTAATGGGATTGTTTCAAGCAGTGTTCGTGAGCTCTTAGAGTGCCCTGTATGCTTGAATGCCATGTACCCTCCAATCCACCAGTGTTCAAATGGTCACACTATATGCTCCAGTTGCAAACCCAGGGTCCATAATCGGTGCCCGACTTGTAGGCATGAGCTTGGCAATATCAGATGTCTGGCACTGGAGAAGGTGGCTGCATCTTTGGAACTTCCGTGTAAATATCAAGGTTTTGGGTGCATTGGTATATATCCATATTATAGCAAGCTAAAACATGAATCTCAATGTGTGTATAGACCCTATAACTGTCCATATGCTGGTTCAGAATGCTCTGTTATGGGTGATATACCCTACCTGGCGTCCCATCTGAAAGAAGACCACAAAGTGGACATGCACAGTGGTAGTACTTTTAACCACCGCTATGTCAAATCAAATCCACAAGAAGTTGAAAATGCCACATGGATGCTGACGGTTTTCAGCTGCTATGGTCAGTATTTTTGTCTACATTTCGAAGCTTTTCAGTTAGGTGCAGCTCCTGTCTACATAGCCTTTTTGCGGTTTATGGGCGATGACAATGAGGCAAAGAATTATAGCTACAGTCTAGAGGTGGGTGGAAATGGGCGGAAAATGGTTTGGCAGGGGGTTCCGAGAAGCATTAGGGACAGCCACTGCAAGGTTCGCGACAGTTACGACGGTCTCATCATTCAAAGGAATATGGCTCTTTTCTTTTCAGGTGGTGACCAGAAGGAGTTAAAGTTAAGAGTTACTGGCAGGATTTGGAAAGAGTAG 918 0.4368 MNMASNSPLFDDIRIHSDIDPPQIEELTDVSELVNDPTQTAHKPNGIVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSSCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQGFGCIGIYPYYSKLKHESQCVYRPYNCPYAGSECSVMGDIPYLASHLKEDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCYGQYFCLHFEAFQLGAAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHCKVRDSYDGLIIQRNMALFFSGGDQKELKLRVTGRIWKE* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0695 305 CDD RING-HC_SIAHs 56 94 - -
Lan13g0695 305 ProSiteProfiles Zinc finger RING-type profile. 58 94 IPR001841 -
Lan13g0695 305 PANTHER E3 UBIQUITIN-PROTEIN LIGASE DIS1 17 305 - -
Lan13g0695 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 110 IPR013083 -
Lan13g0695 305 SUPERFAMILY RING/U-box 50 98 - -
Lan13g0695 305 Pfam Seven in absentia protein family 100 299 IPR018121 GO:0005737|GO:0006511|GO:0007275
Lan13g0695 305 SUPERFAMILY TRAF domain-like 111 303 - -
Lan13g0695 305 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 17 305 - -
Lan13g0695 305 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 167 299 IPR008974 GO:0005515
Lan13g0695 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 166 IPR013083 -
Lan13g0695 305 CDD Sina 172 300 - -
Lan13g0695 305 ProSiteProfiles Zinc finger SIAH-type profile. 111 171 IPR013010 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0695 Lan-Chr13 6306049 6313002 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0764 7 6653641 6656440 Lan13g0695 13 6306049 6313002 LSH