Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan13g0693 | ATGATGTACGGTGATCCTCATAACCACCACCACCAGCAGCAGCAGCAGCAACAACAACAGCAACCGCCACCGCCACCGCATTTTCAGCAGCAGCAGCAGCCAGGTCCAGAATTTCACCGTGGACCACCGCCGCCGCAGATGATGCGCCAACCTTCTGCTTCATCAACCAACATACCTCCAGAGTTTCACCACCCCGCTCCTGGTGGGCCCCACCCTCCTCATTACGATGTTCATGGTGATATCCATGGTGCAAAAAGAATGAGAAAGCTTGCTCAAAGGAAGGCGGTTGATTATACGAGCACAGTTGTGCGTTATATGCAGATTCGTATGTCGCAACGAGATTCAAGGGACAGGACAGTACTCCAACCTACCCCAGCAGCAGCAATTGATATGTTACCAGCAGTTGGCTATTCAGACAATCCATCTACAAGCTTTGCTGCTAAATTTGTTCATACATCTATAAATAAAAATCGTTGCCCTATTAACCGTGTTCTTTGGACTCCAACGGGACGGCGTCTTATTACTGGCTCACAGACTGGGGAATTCACTCTCTGGAATGGACAGTCTTTTAATTTTGAAATGATTCTTCAGGCACATGACCAAGCAATCAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGTTTCTGCAGGACAGATTTGAAGTTCTGCTCATGCTCCGATGATACTACTGTTAAAGTTTGGGATTTTGCACGCTGTCAAGAAGAGTCTTCATTAACTGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCCCTATTAGTATCAGGTGGGAAGGACAATCTTGTGAAACTTTGGGATGCTAAATCGGGAAAAGAACTTTGCTCATTTCATGGGCATAAAAATACTGTCCTCTGTGTCAAGTGGAATCAAAATGGTAACTGGGTATTAACAGCTTCAAAGGATCAAATAGTAAAGCTGTATGACATAAGGGCTATGAAGGAACTTGAATCATTCCGTGGACATCAGAAGGATGTTACTGCTTTGGCTTGGCATCCATTCCACGAAGAATACTTTGTCAGTGGGAGTTATGACGGTTCCATCTTCCATTGGCTTGTTGGGCATGAAACTCCACAAGTTGAAGTTACCAGTGCTCATGATAATAATGTGTGGGACCTTGCTTGGCATCCTATTGGATACCTTCTCTGCAGTGGTAGCAGTGATCATACAACGAAGTTTTGGTGCAGAAATAGGCCAGGAGACACTGTTCGTGATAGATTTAACAATGGCATGCAAGGATATGCTGAGCAAAACCCAGTTCCTGGTCGTGTGGGTGGTAACTTTGCAATGCCTGAAGGTCCAACAACTCCAGGACCATTTCCCCCTGGGTTGACTCGAAATGAAGGTACCATTCCTGGTGTTGGAGTTGCGATGCCCATACTTGATGTGCCTCATGGGGAGCAGATACAGCCCCATCCTGGTTCAATGGGTGCTCCTCCTCTTCCACCAGGTCCACACCCCTCTCTTCTTAATGCCAATCAACAGAGACTGTACCAGCAGAATCCTCAGCAGATCCCACAACATCAACACCAGGGACTACCACAACAGATGGGTCCTTTGCCTATGCCCCCAAATATGCCACAGCTACAACACCCTTCCCAGTCATCCATGGCCCCTTATCCACATTTGCCTCGCCCTCCACCCCAAATGCCACTTGGAATGCCAGGTCCTACGTCACACCCGGTGCCAGGTCCAATGGGCATGCAAGGTGGAATGAATCAGATGGGTCCTCCACCTCCAATGCCACAAGGTCATTATGGGGGCATGAATCAAATGCATTCAGGATCCTTGCCCCCAAGTGGAGGGCCACCTGTTGGAGGTTTTCCAGGCAACATGCCTAATATGCAAGGGCCACCTAATACCGGCTATCCTCAAGGATCATTCAACCGACCTCAAAGTGGACAAATGCCTTTGATGCAAGGGTATAATCCTTACCAGTCTGGAAATCAATCTGGGATGCCTCCAAACCCACAATCAGGGGCACCACACTCTCAAATGCCGAAGTAG | 2142 | 0.4762 | MMYGDPHNHHHQQQQQQQQQQPPPPPHFQQQQQPGPEFHRGPPPPQMMRQPSASSTNIPPEFHHPAPGGPHPPHYDVHGDIHGAKRMRKLAQRKAVDYTSTVVRYMQIRMSQRDSRDRTVLQPTPAAAIDMLPAVGYSDNPSTSFAAKFVHTSINKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEESSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKSGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIVKLYDIRAMKELESFRGHQKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHETPQVEVTSAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTVRDRFNNGMQGYAEQNPVPGRVGGNFAMPEGPTTPGPFPPGLTRNEGTIPGVGVAMPILDVPHGEQIQPHPGSMGAPPLPPGPHPSLLNANQQRLYQQNPQQIPQHQHQGLPQQMGPLPMPPNMPQLQHPSQSSMAPYPHLPRPPPQMPLGMPGPTSHPVPGPMGMQGGMNQMGPPPPMPQGHYGGMNQMHSGSLPPSGGPPVGGFPGNMPNMQGPPNTGYPQGSFNRPQSGQMPLMQGYNPYQSGNQSGMPPNPQSGAPHSQMPK* | 714 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 196 | 228 | - | - | |
| Lan13g0693 | 713 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 299 | 313 | IPR019775 | - | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 238 | 279 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | Gene3D | - | 312 | 449 | IPR015943 | GO:0005515 | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 196 | 228 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | CDD | WD40 | 158 | 439 | - | - | |
| Lan13g0693 | 713 | SMART | WD40_4 | 315 | 354 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | SMART | WD40_4 | 142 | 186 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | SMART | WD40_4 | 357 | 397 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | SMART | WD40_4 | 231 | 270 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | SMART | WD40_4 | 189 | 228 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | SMART | WD40_4 | 273 | 312 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | SMART | WD40_4 | 401 | 440 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | MobiDBLite | consensus disorder prediction | 659 | 713 | - | - | |
| Lan13g0693 | 713 | PANTHER | WD40 REPEAT PROTEIN | 70 | 709 | IPR045245 | GO:0031124 | |
| Lan13g0693 | 713 | Gene3D | - | 98 | 311 | IPR015943 | GO:0005515 | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 408 | 439 | - | - | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 322 | 356 | - | - | |
| Lan13g0693 | 713 | MobiDBLite | consensus disorder prediction | 19 | 49 | - | - | |
| Lan13g0693 | 713 | MobiDBLite | consensus disorder prediction | 1 | 80 | - | - | |
| Lan13g0693 | 713 | MobiDBLite | consensus disorder prediction | 533 | 559 | - | - | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 364 | 396 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 408 | 439 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 322 | 363 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 280 | 321 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | MobiDBLite | consensus disorder prediction | 584 | 607 | - | - | |
| Lan13g0693 | 713 | SUPERFAMILY | WD40 repeat-like | 151 | 439 | IPR036322 | GO:0005515 | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 364 | 396 | - | - | |
| Lan13g0693 | 713 | Pfam | WD domain, G-beta repeat | 360 | 396 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | Pfam | WD domain, G-beta repeat | 408 | 439 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | Pfam | WD domain, G-beta repeat | 194 | 227 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | Pfam | WD domain, G-beta repeat | 239 | 270 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | Pfam | WD domain, G-beta repeat | 316 | 354 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | Pfam | WD domain, G-beta repeat | 277 | 312 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | PRINTS | G protein beta WD-40 repeat signature | 257 | 271 | IPR020472 | - | |
| Lan13g0693 | 713 | PRINTS | G protein beta WD-40 repeat signature | 299 | 313 | IPR020472 | - | |
| Lan13g0693 | 713 | PRINTS | G protein beta WD-40 repeat signature | 427 | 441 | IPR020472 | - | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 154 | 186 | IPR001680 | GO:0005515 | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 280 | 317 | - | - | |
| Lan13g0693 | 713 | MobiDBLite | consensus disorder prediction | 509 | 713 | - | - | |
| Lan13g0693 | 713 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 238 | 270 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan13g0693 | Lan-Chr13 | 6255737 | 6264536 | Dispersed/Wgd |