Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0688 ATGGAGGATAATCCCCCTTCAAATTTTTTGGATGGGGAGGTCATCGGGATAAGATTTGGCATGGCTACACACCAGGAAATTTGTACAGCGTCCATCAGTGACTCTGCAATTAGTCATGCTAGTCAGCTAGCAAATCCTTTTCTTGGCCTTCCCCTTGAATTTGGAAGATGTGAATCATGTGGTGCTTCAGAAGCTGGAAAATGTGAAGGCCACTTTGGGTATATCGAGCTACCTATTCCAATATACCATCCAAGTCATGTCAGTGAATTGAAGCGGATGCTGAGCCTGATTTGTTTAAACTGCTTGAAAATAAAAAAAACCAAGTTTCCAGCATCAAGCAGTGGTGTAGCACAGAGACTTTCACCTTCCTGTTGTCCGGAAACTAATGCTGCACAAGTTTCTATTCGGGAGGTCAAAACAACCGATGGGGCTTGTTATTTGACACTCGAGGTGTCGAAGTCGAAGTTGCAATCTAGTTTTTGGAGCTTCTTAGAAAAATATGGCTATCGCTATGAGGGTTCAAATATTCGAGCTTTGCTTCCCTGTGAGGCAAAGGAAATTATTAAGAGAATTTCTCATGAGACCAAGAAAAAGCTTGCTGGAAAAGGATATTTTCCTCAAGATGGCTATGTTTTAAAGTATCTTCCTGTACCACCAAACTGCTTATCAGTGCCAGTGGCTTCAGATGGCATCAGTGTCATGTCTTCGGACCCTTCCATAACAACACTCAGAAGATTGCTCAGGAAGGTTGAAGTAATCAAAAGCTCTAGGTCTGGTGAACCAAACTTCGAGTCTCATCAACTAGAAGCAAATGAATTGCAGTCAGTTTTTGATCTGTATCTTCAAGTAAGGGGCACTTCTAAGGCAGCCCGCGATATAGAAACTCATTATGGGGTCAATAAAGAGCTCAATGAATCATCAACAAAAGCATGGCTTGAGAAAATGAGGACTCTATTTATAAGAAAGGGTTCAGGTTTTTCTTCTCGCAGTGTTATCACTGGAGATGCCTACAAGAAAATTAATGAAGTTGGAATTCCGGTTGAAGTGGCCCAAAAGATTACTTTTGAGGAAAGAGTTAATATTCATAACTTGAGCTATCTGCAAAAGTTAGTTGACGAACATTTATGTTTGACATACAAGGAAGGTGTGTCAACTTATTCATTAAGGGAAGGCTCAAAGGGCCACATTTATCTTAAGCCGGGTCAGATAGTCCATCGGAGGATTATGGATGGTGACACTGTGTTCATCAACAGGCCACCTACAACACATAAACACTCGTTACAGGCACTGCAAGTTTACATCCATGATGACCATACCGTCAAAATTAATCCTCTCATATGTGGGCCCCTTGGGGCTGATTTTGATGGAGACTGTGTCCATCTATTTTACCCACAGTCACTTGCTGCTAAAGCTGAGGTGTTGGAACTATTCGCCGTGGAGAAACAGCTGCTAAGTTCTCACAGTGGTAATCTGAACCTACAACTGACTTCTGATTCACTATTGTCACTGAAGATGCTGTTCAAGACTTGTATTTTGGATAGAGTGGCAGCTCATAGATTGGCTATGTTTCTTACCCAGCCATTGCCTAGGCCTGCTGTGCTCAAAGCCAATTCTGGTGATGCTTGGACTGCCATGCAACTTTTACAGTGTGCACTGCCCTCTTCTTTTGATTGTGCTGGAGGCCGTTACTTAATTAGCCATAGTGATATTGTGGAGTTTGATTTTAGTAGGGATCTTTTGCCGACTATGATAAATGAAATTGCAGCCTCAATTTTCTTTGCAAAAGGACCTCAGGAAGCACTAAAATTTTTTGACGTTATTCAGCCCTTTCTGATGGAAAACATATTTGCTGATGGGTTTAGTGTTGGTCTTCAGGATTTCTCGATATCCCAGGCGCGGAAAAGAATTATAAATAGAAGCATTGGGAAAGTTTCTCCATTGCTGTATCAGCTAAGGTCAATATACAATGAGCTGGTGGCACAGCAACTGGAAAAGCACATTCAAGATGTTGAAAAACCTGTTATCAATGTTGCTCTAAAGTCATCCAGACTTGGAGATTTGATTGACTCAAAAAGCAAGTCGGCCATCAACAAGGTGGTTCAACAAATGGGGTTCTTAGGCCAACAGCTTTTTGAAAGGGGAAGATTTTACTCAAGGGAGTTGATTGAGGATATTGCATCCCATTTCCACACGAAGTGTTGTTATGATGGGGATGGTTATCCCTCTGCTGAATATGGGCTGCTCAAAGGATGTTTTTTTCATGGCTTGGATCCATATGAAGAGATGGTGCATTCAATTTCCACTAGAGAAATACTTGTGCGTTCTTCGAGAGGATTATCTGAACCAGGAACGCTATTCAAGAACTTGATGGCCATCCTTCGTGATGTTGTGGTTTGCTATGATGGGACAGTACGAAATGTTTGCAGCAATTCGGTCATTCAGTTTGAGTATGGGATACAAGCAGGAGATACGACTCAACACTTATTCCCTGCTGGGGAGCCTGTTGGGGTCTTAGCTGCAACTTCTATGTCAAACCCTGCATATAAGGCTGTTCTTGATGCTAGTCCAAGCAGCACTTCTTCATGGGAGTTGATGAAGGAAATATTACTGTGTAAGGCCAATTTTAGGAATGAACCTATTGATCATCGTGTTATTTTGTATTTGAATGACTGCTGTTGTGGAAGGAGTTATTGCATCGAACATGCAGCATATGCAGTTAAAAATCAATTGAGAAAAGTCACTCTCAAGGACATATCAGTAGAGTTCATCGTTGAATATCAACAGCAGCGAAATCGCAAGGACAGTTCTGAAATTGCGGCTGGGCTTGTTGGCCACATTCATCTGGATGAGGTTATGCTAAAGAAGCTAAAGGTCAATTTGGATGAAGTTTTGCAAAGATGCCAGGAAAGACTTAATTCCTTTAATCGGAAAAAGAAAGTAAATCAAATTTTTAAGAGGACTGAATTGGATTTCAGCGAGTCTTGCTATTGTTCACATCATTCTGCACTATGTGTCAAGTTCCTCTGGCCAGATGGTGATCATAGTGATTTGGACAAAACAGCAAACATCATGTCTGACATAATCTGCCCGGTTTTGTTAGAGACAGTAGTCAAAGGAGATCCACGAATAAGCTCTGCAAATATAATCTGGGTTAATCCAGATACAAACACATGGGTCCGAAACCCCTCCAAATCTCCAAAGGGTGAATTGGCTCTTGATGTCATTCTCGACAAGGCAGCTGTGAAACAAAGTGGCGATGCTTGGAGGATTGTCCATGACTCATGCCTTCCCATCCTTCATTTGATTGATACAAGACGGTCAATCCCTTATGCTATTAAGCAAATTCAAGAGTTACTTGGAATCTCATGTACATTTGCTCAAGCAATTCAGCGTCTTGCCACGTCAGTAAAAATGGTAGCCAAAGGTCTCCTTCGGGAGCATCTCATTCTCTTAGCAAGTAGCATGACTTGCGGTGGGAATTTGGTGGGCTTTAACAAGGGAGGATATAAAGCACTGGCACGACAACTAAACATCCAAGTACCATTTACTGATGCGACACTATTTACACCTCGAAAATGTTTCGAGCGAGCTGCTGAAAAGTTCCATACAGATTCTTTATCAAGTGTAGTTGCCTCCTGTTCATGGGGCAAACATGTGGCTGTGGGTACAGGTTCAAAATTTGATGTCGTATGGAATGCGAAAGAGATAAAGTCCAGCGAGAATAGAGGGATGGATGTATACAATTTTCTTTACATGGTGAAAGACTTCACCAGTGGAGAAGAAGAAAAAAATGCTTGTTTGGGTGAAGACATTGATGATTTGCTAGAAGATGAGAATATGGATTGGGGCATGTCTCCCCAGCATACGTCTGGTTTTGATGATGCAGTCTTTGAAGAGAACTGTGAAGTACCGAATAGTTCAACTTCCAATGGTTGGGACATAAATGCAAATAAGAATGAAACAAAATCCAATGATTGGTCTGGTTGGGGATCAAATAAAGCTGAAGGTGTATCTGAAAATGCCAAGGAGGATTCTTGGAGTTCCGGAAAGCAGAAAACTGATGTTGTCAAAGAAGACTCTTCTAGGTCCAATGCTTGGGATGCCAATACAAAGAAAACAGAGACAAAGTCTAATGATTGGTTGGCCTGGGGAGGTAACAAATCTGAAATACAAGATGTCGGGTTTAAAAGAGCAGAAGAGGATTCTTGGAGCTCTGGTCAGAGGAAAGCTAATGTTGCCCAAGAAGATTCTTCTAAGCCTGGTGCATGGGATGCTAACACCAACCAAGCCAAAACAAAGTCGAATGATTCGTTGGACTGGGGAGGAAAGAAATCTGAAATACAAGATGGTGGGTCCGGAAGAGTCCAAGAGGATTCTTGGAACTCTGGTCAGAGGAAAGCTAGTGTTATCCAAGATGACTCTTCTAAGCCTGGTGCTTGGGATGCAAAAGCCAACCAAGCAAAAACAACATCAAATGAATGGTCAGGGTGGGGAGGAAAGAAATCTGAAGTGCAAGGTGGTGGGTTTGATAGATCCCAAGAGGATTCTGGGAGCTCCTGGAAATGGAATGCTGAATCTAGGTCTAATGCTTGGGAAAGTAATTTCAACAAATCCTCAGAAAACCCAGCATGGGGTTCCCAAAATGAGTCAAATCAAGCTGCAAGTTCCCAAGGATGGGACTCACAAATCGCTTCTGCAAATTCTGGCCCTGACAAAAACTTTCAATGGGGAAAACCCAAATCCTCAGAAAGCCAATCATGGGATTCCAAAAATAAGTCAAATCAGGCTGCAAGTTCTCAAGGATGGGACTCACAAGTCGCTTCAGCTAATTCTGACAGCGACAAAAGCTTTCAATGGGGAAAGCAGGGCAGAGAATCATTCAAGAAAAAACGCTTTGAAAGTTCGCAAGGACGGGGTTCAAATGCAGGTGACTGGAGAAATATGACTCGCCCGCCCAGACCACCACCTCCAATGTACACACCTGAGGAACAAGAAGTTCGTAAGGATATTGATTCTATTGTGCAGTCAATCAGACGTATCATGCAACAAGAAGGGTACAATGATGGGGATCCGCTGGCTTCAGAGGATCAAGCATTTGTGCTTGAGAATGTCTTCGAACACCATCCAGATAAGGAAACCAAAATGGGTGATGGAATTGATTATGTCATGGTTAGCAGACACAGCAATTTTCAGGAAAGTAGATGCATGTATGTGGTTTTAAAGAATGGTAAAAAGGAGGACTTTTCCTACAGGAAGTGCCTGGAAAACCTAGTACGGAAGAAGTATCCAGACGTTGCTGAATCGTTCAACGACAAGCATTTCCGGAAACCTCGTGGAAGAGCAGGAGGGGACCAGGCCCCAACAGCTCCATTGCGTGCTTCTACTGAAACAAACCAGGCACCAAGAACTCCATGGCCTACTTCTACTGAAACAAACCAGGCTCCAACATCATCATGGCCTACATCTACTGAATCAAACCAGGCTCCAACATCATCATGGCCTACATCTACTGAATCAAACCAGGCTCCAACATCATCATGGCCTACTTCTACCGAAACAAACCAGGCCCCAACAGCAACATGGCCAACTTCTAGTGAAGCAAATGAGTAA 5610 0.426 MEDNPPSNFLDGEVIGIRFGMATHQEICTASISDSAISHASQLANPFLGLPLEFGRCESCGASEAGKCEGHFGYIELPIPIYHPSHVSELKRMLSLICLNCLKIKKTKFPASSSGVAQRLSPSCCPETNAAQVSIREVKTTDGACYLTLEVSKSKLQSSFWSFLEKYGYRYEGSNIRALLPCEAKEIIKRISHETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPVASDGISVMSSDPSITTLRRLLRKVEVIKSSRSGEPNFESHQLEANELQSVFDLYLQVRGTSKAARDIETHYGVNKELNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKINEVGIPVEVAQKITFEERVNIHNLSYLQKLVDEHLCLTYKEGVSTYSLREGSKGHIYLKPGQIVHRRIMDGDTVFINRPPTTHKHSLQALQVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVLELFAVEKQLLSSHSGNLNLQLTSDSLLSLKMLFKTCILDRVAAHRLAMFLTQPLPRPAVLKANSGDAWTAMQLLQCALPSSFDCAGGRYLISHSDIVEFDFSRDLLPTMINEIAASIFFAKGPQEALKFFDVIQPFLMENIFADGFSVGLQDFSISQARKRIINRSIGKVSPLLYQLRSIYNELVAQQLEKHIQDVEKPVINVALKSSRLGDLIDSKSKSAINKVVQQMGFLGQQLFERGRFYSRELIEDIASHFHTKCCYDGDGYPSAEYGLLKGCFFHGLDPYEEMVHSISTREILVRSSRGLSEPGTLFKNLMAILRDVVVCYDGTVRNVCSNSVIQFEYGIQAGDTTQHLFPAGEPVGVLAATSMSNPAYKAVLDASPSSTSSWELMKEILLCKANFRNEPIDHRVILYLNDCCCGRSYCIEHAAYAVKNQLRKVTLKDISVEFIVEYQQQRNRKDSSEIAAGLVGHIHLDEVMLKKLKVNLDEVLQRCQERLNSFNRKKKVNQIFKRTELDFSESCYCSHHSALCVKFLWPDGDHSDLDKTANIMSDIICPVLLETVVKGDPRISSANIIWVNPDTNTWVRNPSKSPKGELALDVILDKAAVKQSGDAWRIVHDSCLPILHLIDTRRSIPYAIKQIQELLGISCTFAQAIQRLATSVKMVAKGLLREHLILLASSMTCGGNLVGFNKGGYKALARQLNIQVPFTDATLFTPRKCFERAAEKFHTDSLSSVVASCSWGKHVAVGTGSKFDVVWNAKEIKSSENRGMDVYNFLYMVKDFTSGEEEKNACLGEDIDDLLEDENMDWGMSPQHTSGFDDAVFEENCEVPNSSTSNGWDINANKNETKSNDWSGWGSNKAEGVSENAKEDSWSSGKQKTDVVKEDSSRSNAWDANTKKTETKSNDWLAWGGNKSEIQDVGFKRAEEDSWSSGQRKANVAQEDSSKPGAWDANTNQAKTKSNDSLDWGGKKSEIQDGGSGRVQEDSWNSGQRKASVIQDDSSKPGAWDAKANQAKTTSNEWSGWGGKKSEVQGGGFDRSQEDSGSSWKWNAESRSNAWESNFNKSSENPAWGSQNESNQAASSQGWDSQIASANSGPDKNFQWGKPKSSESQSWDSKNKSNQAASSQGWDSQVASANSDSDKSFQWGKQGRESFKKKRFESSQGRGSNAGDWRNMTRPPRPPPPMYTPEEQEVRKDIDSIVQSIRRIMQQEGYNDGDPLASEDQAFVLENVFEHHPDKETKMGDGIDYVMVSRHSNFQESRCMYVVLKNGKKEDFSYRKCLENLVRKKYPDVAESFNDKHFRKPRGRAGGDQAPTAPLRASTETNQAPRTPWPTSTETNQAPTSSWPTSTESNQAPTSSWPTSTESNQAPTSSWPTSTETNQAPTATWPTSSEANE* 1870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1366 1384 - -
Lan13g0688 1869 Gene3D RNA polymerase II, clamp domain 12 115 IPR044893 -
Lan13g0688 1869 Gene3D - 322 489 - -
Lan13g0688 1869 Pfam Protein of unknown function (DUF3223) 1685 1754 - -
Lan13g0688 1869 Pfam RNA polymerase Rpb1, domain 2 325 478 IPR000722 GO:0003677|GO:0003899|GO:0006351
Lan13g0688 1869 Pfam RNA polymerase Rpb1, domain 3 482 626 IPR007066 GO:0003677|GO:0003899|GO:0006351
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1302 1334 - -
Lan13g0688 1869 Gene3D - 1667 1760 - -
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1509 1617 - -
Lan13g0688 1869 Pfam RNA polymerase Rpb1, domain 5 755 1171 IPR007081 GO:0003677|GO:0003899|GO:0006351
Lan13g0688 1869 Gene3D - 795 835 - -
Lan13g0688 1869 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 13 1234 - -
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1765 1780 - -
Lan13g0688 1869 SMART rpolaneu7 208 507 IPR006592 GO:0003677|GO:0003899|GO:0006351
Lan13g0688 1869 Coils Coil 957 977 - -
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1618 1635 - -
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1452 1471 - -
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1302 1667 - -
Lan13g0688 1869 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 197 1382 - -
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1484 1498 - -
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1765 1869 - -
Lan13g0688 1869 PANTHER DNA-DIRECTED RNA POLYMERASE 197 1382 IPR045867 GO:0003899|GO:0006351
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1337 1365 - -
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1405 1436 - -
Lan13g0688 1869 Pfam RNA polymerase Rpb1, domain 1 40 255 IPR007080 GO:0003677|GO:0003899|GO:0006351
Lan13g0688 1869 MobiDBLite consensus disorder prediction 1790 1869 - -
Lan13g0688 1869 Gene3D RNA polymerase ii 354 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0688 Lan-Chr13 6161410 6205560 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0753 7 6547595 6576499 Lan13g0688 13 6161410 6205560 LSH