Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0687 ATGAGTTCTTTGGTGGGACCACTTGTTCTTTCTACAGATTCTGGTTACAGAGTTTGGGAGGATCCTTCTTTCATCAAATGGAGAAAAAGAGAATCACATGTTACCCTGCATTGCCGTGACTCTGTTGAAGGATCTCTTAAATATTGGTATAAACGCAACCAGGTGGATCATTTGGTTTCAAAATCTGCTGTTTGGAATGATGATGCTGTTGATGAAGCTCTTGATTGTTGTGCATTTTGGGTCAAAGACTTACCATTTGTTAAGTCCTTGTCTGGACATTGGAAATTTTTCCTTGCTGACAGTCCAAACACTGTCCCCGATAAATTTTTTGAAAGTGATTTCCAGGATTTGGAGTGGAAATTTTTGCCTGTTCCTTCAAATTGGCAGATGCATGGATATGATGTCCCTATATATACAAATGTTGTGTATCCATTTCCAGTAGATCCTCCTTTGGTTCCTATTGAAAATCCTACGGGCTGCTATAGAACAGAATTCCATATTCCTAAAGAATGGGAGGGTAGAAGAATTTTGTTACATTTTGAAGCTGTTGATTCTGCCTTTTGTGCATGGATAAATGGGCATCCAATAGGATATAGCCAAGACAGCAGGCTACCTGCAGAGTTTGAAATCACTGATTTTTGTCACCCATGTGGTTCAGACCTTAAGAATGTTCTGGCTGTTCAAGTGTTTAGATGGAGTGATGGCTCTTACCTTGAAGATCAGGACCAATGGCGATTATCTGGCATCCACCGTGATGTGATTCTTCTTGCAAAGCCGAAGGTATTTATCACTGACTATTTTTTCAAATCAATCCTTGCCGAAGATTTTTCTTCCGCGGAGATACTGGTTGAAGTGAAAATAGATAATTCGCAAGAGACATCCAAGGATAATATTCTTACAAACTATACCGTAGAAGCTGCACTATATGATTCTGGGAGCTGGTATACTTGTGATGGAAATACTGATCTCCTTTCATCTAATGTAGCTGACATAAAGTTCCAACCATCCACTGCAACAACACCACTAGGATTTCATGGTTATACGCTTGTTGGAAAACTGCAGTCACCAAAGCTTTGGTCTGCTGAGCAACCATTCCTCTACACCCTAGTTGTCGTCCTCAAAGATCAATCTGGCCACATTATTGACTGTGAGTCATGTTCAGTAGGCTTTAGAAATGTAACTAAAGCCCACAAACAGCTGCTGGTTAATGGACAAGCTGTCGTAATACGTGGTGTGAACAGGCATGAACATCATCCACGAGTTGGTAAGGCAAATATAGAGTCCTGTATGATAAAGGATTTGGTTTTAATGAAGCAAAACAATATTAATGCTGTAAGGAACAGTCATTATCCCCAACATCCACGTTGGTATGAGCTGTGTGATCTGTTTGGCATGTACATGATAGATGAAGCCAACATTGAGACACATGGTTTTGATTACTCTAAACATCTCAAGCATCCAACTCTGGAACCAATTTGGGCAACTTCAATGTTGGATCGTGTGATTGGCATGGTTGAGAGAGATAAAAATCACACATGCATCATCTCTTGGTCTTTAGGGAATGAATCTGGATTTGGACATAATCATTATGCTTTAGCTGGTTGGATTCGAGGAAGAGATTCATCACGGGTATTACATTATGAAGGAGGTGGATCGAGAACTCCATGCACAGATATTGTGTGCCCTATGTATATGCGTGTTTGGGACATGTTGAAAATTGCAAATGATCCTGCAGAAACACGTCCTCTAATACTTTGCGAGTATTCACATGCAATGGGCAACAGCAACGGGAATCTACATACATATTGGGAGGCAATTGACAACACATTTGGTCTCCAAGGAGGGTTTATTTGGGATTGGGTTGATCAGGTGAGTGGTCCTTGA 1884 0.4061 MSSLVGPLVLSTDSGYRVWEDPSFIKWRKRESHVTLHCRDSVEGSLKYWYKRNQVDHLVSKSAVWNDDAVDEALDCCAFWVKDLPFVKSLSGHWKFFLADSPNTVPDKFFESDFQDLEWKFLPVPSNWQMHGYDVPIYTNVVYPFPVDPPLVPIENPTGCYRTEFHIPKEWEGRRILLHFEAVDSAFCAWINGHPIGYSQDSRLPAEFEITDFCHPCGSDLKNVLAVQVFRWSDGSYLEDQDQWRLSGIHRDVILLAKPKVFITDYFFKSILAEDFSSAEILVEVKIDNSQETSKDNILTNYTVEAALYDSGSWYTCDGNTDLLSSNVADIKFQPSTATTPLGFHGYTLVGKLQSPKLWSAEQPFLYTLVVVLKDQSGHIIDCESCSVGFRNVTKAHKQLLVNGQAVVIRGVNRHEHHPRVGKANIESCMIKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDYSKHLKHPTLEPIWATSMLDRVIGMVERDKNHTCIISWSLGNESGFGHNHYALAGWIRGRDSSRVLHYEGGGSRTPCTDIVCPMYMRVWDMLKIANDPAETRPLILCEYSHAMGNSNGNLHTYWEAIDNTFGLQGGFIWDWVDQVSGP* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0687 627 SUPERFAMILY beta-Galactosidase/glucuronidase domain 261 391 IPR036156 -
Lan13g0687 627 Pfam Glycosyl hydrolases family 2 261 391 IPR006102 GO:0004553|GO:0005975
Lan13g0687 627 PANTHER GLYCOSIDE HYDROLASE FAMILY 2 PROTEIN 16 623 - -
Lan13g0687 627 Gene3D Glycosidases 393 626 - -
Lan13g0687 627 Pfam Glycosyl hydrolases family 2, TIM barrel domain 397 624 IPR006103 GO:0004553|GO:0005975
Lan13g0687 627 SUPERFAMILY (Trans)glycosidases 396 624 IPR017853 -
Lan13g0687 627 PANTHER BETA-GALACTOSIDASE 16 623 - -
Lan13g0687 627 PRINTS Glycosyl hydrolase family 2 signature 183 198 IPR006101 GO:0004553|GO:0005975
Lan13g0687 627 PRINTS Glycosyl hydrolase family 2 signature 402 416 IPR006101 GO:0004553|GO:0005975
Lan13g0687 627 PRINTS Glycosyl hydrolase family 2 signature 433 451 IPR006101 GO:0004553|GO:0005975
Lan13g0687 627 PRINTS Glycosyl hydrolase family 2 signature 508 523 IPR006101 GO:0004553|GO:0005975
Lan13g0687 627 PRINTS Glycosyl hydrolase family 2 signature 581 596 IPR006101 GO:0004553|GO:0005975
Lan13g0687 627 SUPERFAMILY Galactose-binding domain-like 86 260 IPR008979 -
Lan13g0687 627 Gene3D Immunoglobulins 260 391 IPR013783 -
Lan13g0687 627 Pfam Glycosyl hydrolases family 2, sugar binding domain 88 259 IPR006104 GO:0004553|GO:0005975
Lan13g0687 627 ProSitePatterns Glycosyl hydrolases family 2 acid/base catalyst. 508 522 IPR023232 -
Lan13g0687 627 Gene3D - 9 259 - -
Lan13g0687 627 ProSitePatterns Glycosyl hydrolases family 2 signature 1. 443 468 IPR023230 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0687 Lan-Chr13 6153457 6160597 Tandem