Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0675 ATGAACACAACACCCATAATTGATCCATTGCAAGGTGATTTCCCAGAAGTCATAGAAGAGTATTTGCAACATGGCTGTATGAAATGTATTTCCTTCAATCGTCGTGGTACCCTTCTTGCTGCTGGGTGCAATGATGGAAGCTGTGTTATCTGGGATTTTGAAACCAGGGGCATTGCTAAAGAGCTTCGAGATAATGAGTGTTCTTCTCCTATAACTAGTATTTGTTGGTCGAAGTGTGGTAATCGAATTCTTGCATCTGCTGCTGATAAGTCATTATCTTTGTGGGATGTTGTGAGTGGTAATAGGATAACACGAATAGTTTTGCAACAAACCCCTCTACAAGTTCGTCTTCATCCAGGTTCCTCACCATCTCTCTGCTTGGCATGCCCTCTCTCATGTGCTCCAATAATTGTTGACTTGAATACGGGAAGCACGACCTTGCTTAAGGTTTTTGTCTCAGAAGTATCCAATGGACCAACTCCTGCATCACGCAACAAGTGCTTTGATGGAACTACCTCCTTCACACCCACGGCTGCGTGTTTTAGTAAATATGGCAAGCTGGTTTATCTGGGAAATTCAAAAGGGGAAATTCTTGTAATTGATCATAAAAATGGTGAAGTACGTGCTATGGTTCCTATCTCTGGTGGGTCTGTAGTGAAGAACATTGTGTTCAGCAGGAACGGACAGTATCTACTAACAAACTCAAATGATCGGGTAATCAGGATCTATGAAAATCTTCTTCCCTTGAAAGATGAAGTTAGAGCCCTTGATGACCTGAATGAGAGGCTCAGTGATTTAAGTGGTGTTGAGAAGCTAAAAGGTGTAGGATCAAAATGTTTAACCTTATTCCGAGAGTTCCAAGATGCAATCACAAAGGTTCACTGGAAAGTGCCCTGCTTCAGTGGTGATGGCGAGTGGGTTGTCGGTGGTTCTGCAAGCAAAGGAGAGCACAAGATTTACGTATGGGATAGGGCTGGGCATCTCGTGAAAATCCTTGAAGGACCTAAGGAAGCTCTCATTGATTTGGCATGGCATCCAGTACGTCCAATTGTTGTATCTGTTTCTTTGAATGGCATAGTTTATATCTGGGCTAAAGATTACACTGAGAGTTGGAGTGCATTTGCTCCTGATTTCAAAGAGCTCGAGGAAAATGAGGAGTACGTGGAGCGAGAAGATGAATTTGATTTGAATCCCGACATTGAGAAGGTAAAAGGATCTGATGCTAACGAAGATGAGGAGGTTGACATTGTAACAGTGGAGAAAGATCCAGCTTTCAGCGACTCTGATATGTCTCAAGAAGAGCTATGTTTCCTGCCAGCAACTCCAATTCGCGATGTCGCTGAACGGCAAGAAGACAAGTTTATAGAAAGTTCTTCAAAGATAGTGGACAGCAATATCTCCGGATCCCCGCTTTCAGAAGGGGCTGGACAAAATGGGCACACGTCGAACAATGCCTCAAGTCCAGTTGAAGATGGTGCTGGGGGAACGCTCGTTAAAAGAAAGCGGAAACCTTCAGAGAAGGTGTTGGATTTGCAGGATGAAAAAGTCAAGAAGCCATCAAAATCTAGCAAAGCATCAAAATCTAAAAGTAAATCTCTGGTTGATCAGGATAACAATGGTAATGGTTTTCACAGTGATGAGATTTCTGATTAA 1653 0.4283 MNTTPIIDPLQGDFPEVIEEYLQHGCMKCISFNRRGTLLAAGCNDGSCVIWDFETRGIAKELRDNECSSPITSICWSKCGNRILASAADKSLSLWDVVSGNRITRIVLQQTPLQVRLHPGSSPSLCLACPLSCAPIIVDLNTGSTTLLKVFVSEVSNGPTPASRNKCFDGTTSFTPTAACFSKYGKLVYLGNSKGEILVIDHKNGEVRAMVPISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPLKDEVRALDDLNERLSDLSGVEKLKGVGSKCLTLFREFQDAITKVHWKVPCFSGDGEWVVGGSASKGEHKIYVWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLNGIVYIWAKDYTESWSAFAPDFKELEENEEYVEREDEFDLNPDIEKVKGSDANEDEEVDIVTVEKDPAFSDSDMSQEELCFLPATPIRDVAERQEDKFIESSSKIVDSNISGSPLSEGAGQNGHTSNNASSPVEDGAGGTLVKRKRKPSEKVLDLQDEKVKKPSKSSKASKSKSKSLVDQDNNGNGFHSDEISD* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0675 550 Pfam WD domain, G-beta repeat 23 52 IPR001680 GO:0005515
Lan13g0675 550 Pfam WD domain, G-beta repeat 69 96 IPR001680 GO:0005515
Lan13g0675 550 ProSiteProfiles Trp-Asp (WD) repeats profile. 27 61 IPR001680 GO:0005515
Lan13g0675 550 SUPERFAMILY WD40 repeat-like 18 363 IPR036322 GO:0005515
Lan13g0675 550 MobiDBLite consensus disorder prediction 526 550 - -
Lan13g0675 550 SMART WD40_4 276 323 IPR001680 GO:0005515
Lan13g0675 550 SMART WD40_4 161 201 IPR001680 GO:0005515
Lan13g0675 550 SMART WD40_4 204 244 IPR001680 GO:0005515
Lan13g0675 550 SMART WD40_4 14 52 IPR001680 GO:0005515
Lan13g0675 550 SMART WD40_4 55 96 IPR001680 GO:0005515
Lan13g0675 550 SMART WD40_4 325 364 IPR001680 GO:0005515
Lan13g0675 550 ProSitePatterns Trp-Asp (WD) repeats signature. 83 97 IPR019775 -
Lan13g0675 550 Gene3D - 22 250 IPR015943 GO:0005515
Lan13g0675 550 ProSiteProfiles Trp-Asp (WD) repeats profile. 68 105 IPR001680 GO:0005515
Lan13g0675 550 ProSitePatterns Trp-Asp (WD) repeats signature. 39 53 IPR019775 -
Lan13g0675 550 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 6 532 IPR037850 GO:0048188
Lan13g0675 550 MobiDBLite consensus disorder prediction 495 521 - -
Lan13g0675 550 MobiDBLite consensus disorder prediction 459 490 - -
Lan13g0675 550 MobiDBLite consensus disorder prediction 455 550 - -
Lan13g0675 550 Gene3D - 269 389 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0675 Lan-Chr13 5848300 5852981 Dispersed/Wgd