Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0669 ATGGGGATCCAAACTATGGGGTCTCAAGCTGGTGGTGGTGGAGATAGTAACGGAAAAAGGTCACAAGTACAGCCTCTGGTCCAGCAAAACTCGATGTACAATCTCACACTCGACGAAGTTCAGAATCAATTAGGCGATTTAGGGAAGCCATTAAGTAGTGTGAACCTTGATGAGCTTCTAAAAAATGTATGGGCCGTTGAGGCAAATCAGTCCGTGGCTTTGGGCATTGAGGGCACACCGCAAGTTAATCAAGTTGAGCTTCAGCATCAAGGAAATCCGTCATTAACTGATGCACTAAGCAAGAAGACTGTCGACGAGGTTTGGAGGAATATCCAACAAAGCAAAAATAATAACGAGAAGAAATCTCAAGAAAGACAACCTACCTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATCGTCGCAGAAGGGTCGTCTAATGAAAAGAATACTAGTACTATAGCTGCCGTTGATTCAAATGTAGCAATTCAGCAGTTTCCTCCGCAAGGTCAGTGGATGCCGTATCCACAACCACAATATCAGCATCCACAACAAAGTTTAATGGGGATTTACATGCCTGGCCAGGGTATAGCACAGCCATTACACATGAGGGTTGGTGCTTCAGTGGATGCTGTTCCATTTGCCGATAATCAGGTGGCATTGCCTCCACCTTTGATGGGAACAATGTCAGATACGCAGACACCTGGAAGAAAAAGGAACACTCCAGAGGACATAGTGGAAAAGAGTGTCGAGAGGAGGCAAAAGAGGATGATCAAGAATCGGGAATCTGCCGCCCGTTCAAGAGCAAGGAAGCAGGCATACACAAATGAATTGGAGAATAAAGTCTCGCGTCTGGAAGAGGAAAACGAAAGGCTGAGGAAACAACAGCAGCTAGAGAAGATGTTGCCATGTGCACCGCGTCCTGAACCTAAATGTCAACTTCGCCGAATAGCATCGGCTCCATTCTGA 978 0.4601 MGIQTMGSQAGGGGDSNGKRSQVQPLVQQNSMYNLTLDEVQNQLGDLGKPLSSVNLDELLKNVWAVEANQSVALGIEGTPQVNQVELQHQGNPSLTDALSKKTVDEVWRNIQQSKNNNEKKSQERQPTLGEMTLEDFLVKAGIVAEGSSNEKNTSTIAAVDSNVAIQQFPPQGQWMPYPQPQYQHPQQSLMGIYMPGQGIAQPLHMRVGASVDAVPFADNQVALPPPLMGTMSDTQTPGRKRNTPEDIVEKSVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQQQLEKMLPCAPRPEPKCQLRRIASAPF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0669 325 MobiDBLite consensus disorder prediction 1 25 - -
Lan13g0669 325 MobiDBLite consensus disorder prediction 225 246 - -
Lan13g0669 325 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 323 IPR043452 GO:0003700|GO:0045893
Lan13g0669 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 253 298 IPR004827 GO:0003700|GO:0006355
Lan13g0669 325 Gene3D - 253 306 - -
Lan13g0669 325 CDD bZIP_plant_BZIP46 255 309 - -
Lan13g0669 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 258 273 IPR004827 GO:0003700|GO:0006355
Lan13g0669 325 SUPERFAMILY Leucine zipper domain 255 300 IPR046347 GO:0003700|GO:0006355
Lan13g0669 325 Pfam bZIP transcription factor 255 303 IPR004827 GO:0003700|GO:0006355
Lan13g0669 325 PANTHER BZIP TRANSCRIPTION FACTOR 4 323 - -
Lan13g0669 325 MobiDBLite consensus disorder prediction 301 325 - -
Lan13g0669 325 SMART brlzneu 251 319 IPR004827 GO:0003700|GO:0006355
Lan13g0669 325 Coils Coil 271 305 - -
Lan13g0669 325 PRINTS cAMP response element binding (CREB) protein signature 250 266 - -
Lan13g0669 325 PRINTS cAMP response element binding (CREB) protein signature 268 288 - -
Lan13g0669 325 PRINTS cAMP response element binding (CREB) protein signature 288 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0669 Lan-Chr13 5735007 5737946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0669 24 325 bZIP Transcription Factor Family AT3G56850 52.597 3.39e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan13g0669 bZIP_1 3.4e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1282 8 19324549 19329002 Lan13g0669 13 5735007 5737946 LSH