Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0664 ATGGGACGCATGAACACTAATGAGATTGAAGATGAGATACCCCCCAACAATCTGACAGAGTCACAGATGAATGATGAGGGTGATGGAGGAAGTGCCAGTGGAGTTATTCTGAAGAAAGGTCCATGGACATCTGTTGAAGATGCGATTTTAGTTGATTATGTCACGAGGCATGGGGAGGGGAACTGGAATGCTGTTCAGAAGCATTCGGGCTTGTCGCGTTGTGGAAAAAGTTGCCGATTGCGATGGGCCAATCACCTCAGGCCGAATTTAAAGAAAGGGGCGTTTACTGCAGAAGAGGAGCAGTTGGTTACTGAACTTCACGCAAAAATGGGAAACAAGTGGGCACGCATGGCTGTACACTTGCCTGGTCGCACAGATAATGAGATAAAGAACTACTGGAACACCCGAATCAAGAGGTGTCAACGGGCTGGCTTGCCACTTTATCCTCCTGAAGTGTGTTTGAAAGCATTCCAAGAGAGTCAGCAAAGCCAAAGCACTGGTGGATTTAATGCTGGCCGTAAAGTGCATCATAATTTCTTGCACAAGAACAGTTACGAGATACATGATTCAATATTTGACAGACTGAAGGATAATCAGAGAATTTCACCTAATGTGCCTGAGCTTCCTAATATTTATGATTATAGCAATATGCTGAAAAGTCTTGATTCCTCTCAGTACTGTAGTTTTGCGCCATCAACATCTCCTATCCATAAGCGTCTTCGAGATTCAACAATGCCATTTCTTGGTTCCAGTGATATGATCAGAAATGTGTTTAATCCATTTGATCATGTTCAGGCTAATTTCTCTGATAAGATTGCTCAATCATTTGGAATGCAATCACCCCTTGATCATGGTCCCTCCTCACACAGCTCAATATGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCAACTTATGAGGCTGTGAAGCTAGAGCTCCCTTCACTCCAATATCCGGATATTGATTTAGGTAGCTGGGGTACATCTCCCCCACCTCCTCTACTTGATTCGGTTGATGATTTCATTCAGTCTCCTACACCAATTAGTGCAATGGAGTCAGATAGTTCTTCCCCACAAAATAGTGGCCTTCTGGATGCTCTACTTTATCAGGCAAAGACTATGAGCAGTTCCAAGAACCATTATTCTGACAAGAGTTCAAACTCATCTACTGCAACTCCTGGTCACAGAGCAGACAGCTCTATGTTGAACATGTGCGAGACGGAATGGGAAGACCATACTGACCCTGTATCTCCATTTGGTGCAACTTCTATATTGAATGAATGTCCTGCTGTTGCCAATGCAAATTCATTGGATGAAACACCACCCGATCAGACCTTCAATGGGAATATTGTGAAATTAGAGTCTGCTGACCAGGTTTGGACCCCGAGCAGTGGAAATCAAACCATGTCTATGATGAATTTTACTCGGCCAGACTTGTTGCTTGATGCAGATTGGCAGGATTCTGGGCATGTCAAGAACCAAACCATCACAACTGATGCTATATCAATCCTTTTAGGAGATGATTTAGCCACTGGCTACAACAAGCATATGAATGCTGGAACTTCTAAGTCATGTCAGGTATGGGGCTTTGGTTCTTGTCCATAG 1617 0.436 MGRMNTNEIEDEIPPNNLTESQMNDEGDGGSASGVILKKGPWTSVEDAILVDYVTRHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEEQLVTELHAKMGNKWARMAVHLPGRTDNEIKNYWNTRIKRCQRAGLPLYPPEVCLKAFQESQQSQSTGGFNAGRKVHHNFLHKNSYEIHDSIFDRLKDNQRISPNVPELPNIYDYSNMLKSLDSSQYCSFAPSTSPIHKRLRDSTMPFLGSSDMIRNVFNPFDHVQANFSDKIAQSFGMQSPLDHGPSSHSSICYSHSLSNGNSSTSKPTYEAVKLELPSLQYPDIDLGSWGTSPPPPLLDSVDDFIQSPTPISAMESDSSSPQNSGLLDALLYQAKTMSSSKNHYSDKSSNSSTATPGHRADSSMLNMCETEWEDHTDPVSPFGATSILNECPAVANANSLDETPPDQTFNGNIVKLESADQVWTPSSGNQTMSMMNFTRPDLLLDADWQDSGHVKNQTITTDAISILLGDDLATGYNKHMNAGTSKSCQVWGFGSCP* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0664 538 MobiDBLite consensus disorder prediction 1 35 - -
Lan13g0664 538 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 86 IPR017930 -
Lan13g0664 538 MobiDBLite consensus disorder prediction 346 365 - -
Lan13g0664 538 MobiDBLite consensus disorder prediction 326 365 - -
Lan13g0664 538 MobiDBLite consensus disorder prediction 10 28 - -
Lan13g0664 538 SMART sant 38 88 IPR001005 -
Lan13g0664 538 SMART sant 91 139 IPR001005 -
Lan13g0664 538 Gene3D - 94 140 - -
Lan13g0664 538 MobiDBLite consensus disorder prediction 379 401 - -
Lan13g0664 538 SUPERFAMILY Homeodomain-like 38 133 IPR009057 -
Lan13g0664 538 Pfam Myb-like DNA-binding domain 92 135 IPR001005 -
Lan13g0664 538 Pfam Myb-like DNA-binding domain 39 86 IPR001005 -
Lan13g0664 538 MobiDBLite consensus disorder prediction 379 402 - -
Lan13g0664 538 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 141 IPR017930 -
Lan13g0664 538 ProSiteProfiles Myb-like domain profile. 37 86 IPR001005 -
Lan13g0664 538 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 54 63 IPR001345 GO:0003824
Lan13g0664 538 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Lan13g0664 538 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 5 537 - -
Lan13g0664 538 CDD SANT 41 86 IPR001005 -
Lan13g0664 538 Gene3D - 38 91 - -
Lan13g0664 538 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 537 - -
Lan13g0664 538 CDD SANT 94 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0664 Lan-Chr13 5659504 5664622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0664 36 536 MYB Transcription Factor Family AT3G11440 42.667 8.50e-119 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan13g0664 Myb_DNA-binding 1.3e-13 CL0123