Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0661 ATGTCTCCATCAATGAAATCAAAATCCAAGTCCAAGGAGAAAGCCTCTGCAAGGGCCAGGAAGGACCAACAGAAGTGTTCTCCAAAGACTTCCGTGACTACTAATCACGGGAGTGGCATTCCTACCACTGCGTACAATCCCATCTCTGGAACATTTCATACCTTAGAAACATCATTAGTTGCTTATTCAGCTCCACTTCATGAAAACAGCCATTTCCTAAAAATAGATGATACAGATTATCATTCTAGTAGTCCTCAAGGAACGGTGTCCGAGTGTGATTCATTTTCTAACAATGGAAGCTGCTCTGGTGAATCAGAAGACCATAAAGAGAAAGTAGCAAACTCTTCTATGCGGCCGGATTCTATACCCGGTTGTGATAATGAGAGAAGGGGGAAGATCCGGCTGAAGAATGAGAAAAAGCACCAGAGGCAGAGAGAAAGGAGAGCTCAGGAGTTGCACGACCGTTGCAGTGGCTATCTAATGTCAAGGAAGCTTGAAGCACTTTCGCAGCAGTTAGTGGCGATGGGTTTCTCTTCTGAGCGAGCAACATTGGCATTGATGTTAAATGATGGCAAATTGGAGGAATCAGTATCCTGGCTCTTCGAAGAAAGCGAAGACGAATCATATACCAAGAATACTGCTACCAATCTTCTAAGTGAAGGTAATTTGAAAATTGACATAAGTGAAGAGCTTTCTCAGATATCTGCTATGGAGGTGAGGTACAATTTTTCAAAGCAAGAGGTTGAAAGAGTGGTTGTTGCCTGTGAAGGTGATATTCAGAGAGCCGAAAATACCTTAAAATCGCCAAAGCAGGAGTCTCCTGTGATCCAACCAAAATTAGAAGATTCTGCTCAAAATAATAGCTTGGTGAGATCACAAGGGTTACCAACAGCTTCAGTTTCAATGCAACAGAGAGGGAATGAATATGACTACTACTATTCCAAAGTAGGTAATAGTGGTGCTTCTATGCTCCCAGATCCTGAAAGCAAGAATTTACAGTCTCTACACTTGAATCATCCAAATGAACCAACCGAAAAAAGATGGGGTGTTACTGGATCAAGCCCTTCTACTATGTTGATGATGGCACCATCGATGCAAGCACCGTCTTCCTTTGCTAAAATAGATGCCAAGCCTAGTGCCCATTGGAATGAAGGGAGAATGATTCAACAAGGATTTGGAAGGGAGCCAGTAGTCATGATGCAGCATCCAAAGTTCACAAATGGCAAGCAAAATTCGATTTCTTCTAGAAATGTCTCACCTTCAGGGACAGAAGGGTGCTATGTAAACAATATTCCAAATGCTGAAAATGCAAGATCAAATGGGAGGTTACTACAATATCATGACACAGGAAGTGCAGGTACACAACATATAGAGCAATTTTGTCAAGCTCCTTATAACGAATATTCCGATGTCTTCGGGCCAATCAACAACTTATCAGCCAGGGTGGGAGGTTTCTATAAGCCAATGCATGCACCATCACCATTGCCTTCGCCTACAATCGGTCCTCAGCATCAGGGTTCATGGAGTGCGAGTGCATCTTCGCCAGCACTTACATTTCCACCATCCCTTGGACTTTTTTCTGGTCATCATAATGCATCAGACAGAACATTCAGCTCACATTCACATGTTGATTGGAACAACGGCAGCTTGATGCCAGAAATCGACTACACCAATATAGATTGGACATTTGATACGTACCCGAAATCAGGTGGATTGTGGTTAGGGATCTCATCATTTTTGAGAAACAGTTCTCCATGCAAGAGCAGATTACAAAATGGTGGGATGGCTAAGGAATCTTCATCATATGCTGGTTTGAGGGAGTGGACAACTCCTTTTGCTGGGAAGGACATGTTCAGTGTTCCTAGGCAGCTTGTTACCCCTACTCCTCTGTAA 1893 0.4305 MSPSMKSKSKSKEKASARARKDQQKCSPKTSVTTNHGSGIPTTAYNPISGTFHTLETSLVAYSAPLHENSHFLKIDDTDYHSSSPQGTVSECDSFSNNGSCSGESEDHKEKVANSSMRPDSIPGCDNERRGKIRLKNEKKHQRQRERRAQELHDRCSGYLMSRKLEALSQQLVAMGFSSERATLALMLNDGKLEESVSWLFEESEDESYTKNTATNLLSEGNLKIDISEELSQISAMEVRYNFSKQEVERVVVACEGDIQRAENTLKSPKQESPVIQPKLEDSAQNNSLVRSQGLPTASVSMQQRGNEYDYYYSKVGNSGASMLPDPESKNLQSLHLNHPNEPTEKRWGVTGSSPSTMLMMAPSMQAPSSFAKIDAKPSAHWNEGRMIQQGFGREPVVMMQHPKFTNGKQNSISSRNVSPSGTEGCYVNNIPNAENARSNGRLLQYHDTGSAGTQHIEQFCQAPYNEYSDVFGPINNLSARVGGFYKPMHAPSPLPSPTIGPQHQGSWSASASSPALTFPPSLGLFSGHHNASDRTFSSHSHVDWNNGSLMPEIDYTNIDWTFDTYPKSGGLWLGISSFLRNSSPCKSRLQNGGMAKESSSYAGLREWTTPFAGKDMFSVPRQLVTPTPL* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0661 630 MobiDBLite consensus disorder prediction 7 25 - -
Lan13g0661 630 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 1 627 - -
Lan13g0661 630 MobiDBLite consensus disorder prediction 79 102 - -
Lan13g0661 630 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 163 203 IPR015940 -
Lan13g0661 630 MobiDBLite consensus disorder prediction 1 42 - -
Lan13g0661 630 MobiDBLite consensus disorder prediction 494 513 - -
Lan13g0661 630 SMART uba_6 227 268 IPR015940 -
Lan13g0661 630 SMART uba_6 165 202 IPR015940 -
Lan13g0661 630 MobiDBLite consensus disorder prediction 264 286 - -
Lan13g0661 630 SUPERFAMILY UBA-like 167 209 IPR009060 GO:0005515
Lan13g0661 630 MobiDBLite consensus disorder prediction 26 42 - -
Lan13g0661 630 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 1 627 - -
Lan13g0661 630 Gene3D - 130 216 - -
Lan13g0661 630 Coils Coil 245 265 - -
Lan13g0661 630 MobiDBLite consensus disorder prediction 78 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0661 Lan-Chr13 5630489 5634302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0661 7 289 EF-hand Containing Proteins AT5G12120 47.719 2.01e-75 251
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0721 7 6132991 6136365 Lan13g0661 13 5630489 5634302 LSH