Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0651 ATGGCTGATGCCAGTCCTCGGACTGATATTTCTACAGATGCTGACACTGATGATAAGAATCAGCAGTTTGATAGAAGTCTATCTCATGCTGGTATGGTTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGAGTCTCCGTAGGCTTGCTCAGAATCGTGAGGCAGCAAGGAAAAGTCGGCTGAGAAAGAAAGCCTATGTCCAACAGCTGGAAAGTAGTCGTTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAGTCTTCATATCAAGCTCGGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCAATGCAGTTTGATGCTGAATATGCAAGGTGGCTGGAAGAGCAGAATCGGCAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACGGAACTCCGCATGATTATTGATGGTATATTGGCACATTATGATGAGATTTTTAGGCTGAAAGGTATTGCAGCTAAGGCTGATGTTTTCCATTTGTTGTCTGGAATGTGGAAAACACCCGCCGAGAGGTGTTTTTTGTGGCTAGGTGGTTTTCGGTCATCTGAAGTCCTTAAGCTTCTGGTAAATCAATTGGAACCTCTCACGGAGCAGCAGGTGGTGGGTATCACCAACTTGCAGCAATCATCGCAACAAGCAGAAGATGCATTATCTCAGGGCATGGATGCATTGCAACAGTCCCTTGCTGAGACATTGTCTACTGGATCACAGAACTCATCTGGTTCATCGGGGAATGTGGCAAATTACATGGGTCAAATGGCAATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTTATTCGACAGGCTGACAATCTGCGCCAGCAAACTCTCCAGCAAATGCACCGTATACTGACAACTCGCCAATCGGCCCGTGCCCTTCTTGCAATACATGACTATTTTTCACGGCTTCGTGCTCTCAGTTCGCTCTGGCTTGCCCGCCCAAGAGATTGA 999 0.4675 MADASPRTDISTDADTDDKNQQFDRSLSHAGMVSDSSDRSKDKTDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGDQAHSMSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIIDGILAHYDEIFRLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSEVLKLLVNQLEPLTEQQVVGITNLQQSSQQAEDALSQGMDALQQSLAETLSTGSQNSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0651 332 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Lan13g0651 332 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 1 332 - -
Lan13g0651 332 PANTHER TRANSCRIPTION FACTOR TGA9 1 332 - -
Lan13g0651 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351|GO:0043565
Lan13g0651 332 Gene3D - 46 95 - -
Lan13g0651 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Lan13g0651 332 Coils Coil 123 143 - -
Lan13g0651 332 Pfam bZIP transcription factor 47 87 IPR004827 GO:0003700|GO:0006355
Lan13g0651 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Lan13g0651 332 MobiDBLite consensus disorder prediction 35 49 - -
Lan13g0651 332 Coils Coil 66 93 - -
Lan13g0651 332 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Lan13g0651 332 MobiDBLite consensus disorder prediction 1 49 - -
Lan13g0651 332 MobiDBLite consensus disorder prediction 10 24 - -
Lan13g0651 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0651 Lan-Chr13 5520916 5529190 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan13g0651 DOG1 4e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0703 7 5883400 5890598 Lan13g0651 13 5520916 5529190 LSH