Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0642 ATGGAAACTACCCATTTGTTGATTTTAGTTGTTGGACTAACATCAGCTACATTTTTTGTCATTCTTGCATTTTGTGTCTTCTTATGCAGGAGAAGAAAATCAAAACATGAGAGTGGAAAAGACATAGAATGGTCAGAACAGAATATTCAGGAAGATGATATAATTCAGAAGGAGGATTTGATCATTTTTGAAGGTGGAGAGGACCTTACAATATGTGATATATTGGATGCTCCAGGGGAAGTGATTGGAAAATCAAATTATGGGACACTGTATAAGGCCTTGTTGCAAAGGAGCAACAAAGTGAGGTTGTTGAGGTTTCTGAGGCCAATTTGCACTACAAGAGCTGAAGATTTGGATGAAATTGTTCAGTTTATTGGAAGGATAAGGCACCCTAATTTGGTACCACTTCTTGGATTTTACACTGGGCCAAGGTTTGAGAAGCTTCTAGTTCATCCTTTTTATAGAAATGGGAATTTGGCTCAGTTCATAAGAGATGGAAATGGAGAGTGTTACGAATGGTCTATCATATACAGAATATCCTATGGTATAGCTAAGGGATTAGAGCGTCTTCACACGGGGCAGGAGAAGCCTATTATCCATGGAAATCTCAAGTCGAAAAACATCCTTTTGGATCACTCGTATCGACCATACATCTCAGATTCAGGCCTCCATCTTCTGTTGAATCCTACCGCTGGCCAAGAAATGCTTGAAACTTCAGCTGCTCAAGGTTATAAGGCACCCGAGCTTATCAAAATGAAGGATGCTAGTGAAGAAACTGATATATATAGCCTCGGTGTTATCTTTCTGGAATTACTTTCAGGGAAGGAACCGATAAATGAGCACCCTACTCCTGATGGGGATTTCTATTTGCCGAATTTCATGAGAAACGCTGTCCTTGGACAACGAATTTCCGATTTATACCATCCAGCCATTCTTCTCGGAAACGGCAGAGATGATAGAGTTCCAGTTTCAGAAGAATGCATTCTCAAATATTTTCAACTTGCTTTGGCTTGTTGCTCCCATTCCCCTTCAATCAGACCTAACATAAAGCAGGTCCTTCGGAAGCTTGAAGAAGTTGCAGGCTAG 1086 0.4042 METTHLLILVVGLTSATFFVILAFCVFLCRRRKSKHESGKDIEWSEQNIQEDDIIQKEDLIIFEGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPICTTRAEDLDEIVQFIGRIRHPNLVPLLGFYTGPRFEKLLVHPFYRNGNLAQFIRDGNGECYEWSIIYRISYGIAKGLERLHTGQEKPIIHGNLKSKNILLDHSYRPYISDSGLHLLLNPTAGQEMLETSAAQGYKAPELIKMKDASEETDIYSLGVIFLELLSGKEPINEHPTPDGDFYLPNFMRNAVLGQRISDLYHPAILLGNGRDDRVPVSEECILKYFQLALACCSHSPSIRPNIKQVLRKLEEVAG* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0642 361 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 359 - -
Lan13g0642 361 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Lan13g0642 361 ProSiteProfiles Protein kinase domain profile. 76 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan13g0642 361 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 359 - -
Lan13g0642 361 Gene3D Transferase(Phosphotransferase) domain 1 154 361 - -
Lan13g0642 361 SUPERFAMILY Protein kinase-like (PK-like) 79 356 IPR011009 -
Lan13g0642 361 Gene3D Phosphorylase Kinase; domain 1 77 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0642 Lan-Chr13 5399347 5401907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0642 1 359 Carbohydrate Esterase AT5G61570 54.813 1.38e-133 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan13g0642 PK_Tyr_Ser-Thr 6.6e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0696 7 5819395 5821895 Lan13g0642 13 5399347 5401907 LSH