Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0640 ATGAAGTATGTGCTGGTGACAGGTGGTGTTGTCAGTGGACTTGGAAAAGGAGTCACTGCCAGCAGTGTTGGGGTACTCCTCAAGGCCTGTGGATTTCGAGTTACTTCGATCAAGATCGATCCCTACCTCAACACCGATGCAGGTACAATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTTCTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGCTTCTTGGACATCAAATTAACCCGTGACAATAATATCACAACTGGAAAAATATATCAGTCTGTCATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTCCAGGTTGTTCCACACATTACAGATGCCATCCAAGCGTGGATAGAGCGTGTGGCACAGATACCAGTTGATGGAAAAGATGGCCCGGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGACATCGAGTCCATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCTCTGGCAACTTCTGTTTGATTCATGTCAGTCTGGTGCCTGTTCTCAGTGTTGTTGGTGAACCGTTATCAAACATAGTTAACCTCCATGATGTTCCAAACATTTGGCACATCCCTTTGCTATTAAGAGACCAGAAGGCACACGAGGCAATCCTGAAAGCATTAAATCTGCAAGGTGTTGCTACAGAGCCTAACTTCAAGGAGTGGATCAGTAGGACAAAAGTCCATGACAAATTTCATGAATCTGTTAGAATTGCAATGGTGGGAAAATATACTGGCCTTTCAGATGCATATCTTTCAGTGCTGAAGGCACTTTTACATGCTTCTGTTGCTCACAATCATAAACTTATTGTGGACTGGGTTCCAGCTGAGGATCTTGAAGATGGCACTTTTAAGGAGAATCCTGATGCACATGAAGCTGCTTGGGGTCTTTTGAAGGGAGCTAACGGGATTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTTTGCCCGAGAGAACAATGTTCCCTTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTAATTGAGTTTGCAAGATCTATTCTAGGTCTTCTTGATGCTAATAGCACTGAGTTTGATCCTGAAGCCAAAACCCCTTGTGTCTTATTTATGCCAGAAGGTTCGAAGACTCATATGGGCGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTCCAAGTTGCTGACTGCAAATCTGCCAAACTGTATGGTAATGCGAGCTTTGTTGATGAGCGACATCGGCATAGATACGAGGTTAATCCTGACATGATATCACAATTTGAGAGTGCTGGTCTATCTTTCGTGGGGAAAGATGAAACTGGGAGGCGCATGGAGATAATTGAATTGCCCGGTCATCCTTTCTTTGTTGGTGCTCAGTTTCATCCCGAGTTCAAGTCAAGACCAGGGAAACCTTCTCCACTATTCTCAGGATTAATTTCAGCAGCATGCAAAATGAGCAGGACAGTTCTGCCAACAAGCAACGGCCATGCCAAGTTAACTAATGGTATACATAATGGACACTTGTCGGTAAACGCACACAACGGAAATGGGTCCAAATCTCCCAATGGGTCCATAAATGGTGTACACACCAATGGAAATGGCCTACACGCCGATGGGAGCTTTTAA 1683 0.445 MKYVLVTGGVVSGLGKGVTASSVGVLLKACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQAWIERVAQIPVDGKDGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGSGNFCLIHVSLVPVLSVVGEPLSNIVNLHDVPNIWHIPLLLRDQKAHEAILKALNLQGVATEPNFKEWISRTKVHDKFHESVRIAMVGKYTGLSDAYLSVLKALLHASVAHNHKLIVDWVPAEDLEDGTFKENPDAHEAAWGLLKGANGILVPGGFGDRGVQGKILAAKFARENNVPFLGICLGMQIAVIEFARSILGLLDANSTEFDPEAKTPCVLFMPEGSKTHMGGTMRLGSRRTYFQVADCKSAKLYGNASFVDERHRHRYEVNPDMISQFESAGLSFVGKDETGRRMEIIELPGHPFFVGAQFHPEFKSRPGKPSPLFSGLISAACKMSRTVLPTSNGHAKLTNGIHNGHLSVNAHNGNGSKSPNGSINGVHTNGNGLHADGSF* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0640 560 Pfam CTP synthase N-terminus 2 191 IPR017456 GO:0003883|GO:0006221
Lan13g0640 560 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 254 507 - -
Lan13g0640 560 SUPERFAMILY Class I glutamine amidotransferase-like 252 504 IPR029062 -
Lan13g0640 560 CDD CTPS_N 2 223 IPR017456 GO:0003883|GO:0006221
Lan13g0640 560 CDD GATase1_CTP_Synthase 253 498 IPR033828 GO:0003883|GO:0006241
Lan13g0640 560 Gene3D - 193 247 IPR027417 -
Lan13g0640 560 Gene3D - 1 192 IPR027417 -
Lan13g0640 560 Gene3D - 249 513 IPR029062 -
Lan13g0640 560 PANTHER CTP SYNTHASE 1 191 - -
Lan13g0640 560 PANTHER CTP SYNTHASE 192 530 - -
Lan13g0640 560 MobiDBLite consensus disorder prediction 521 560 - -
Lan13g0640 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 227 IPR027417 -
Lan13g0640 560 Pfam Glutamine amidotransferase class-I 264 499 IPR017926 -
Lan13g0640 560 PANTHER CTP SYNTHASE 192 530 IPR004468 GO:0003883|GO:0006221
Lan13g0640 560 PANTHER CTP SYNTHASE 1 191 IPR004468 GO:0003883|GO:0006221
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0640 Lan-Chr13 5381926 5388563 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0640 13 5381926 5388563 Lan19g0052 19 399326 406525 PCT
Lan13g0640 13 5381926 5388563 Lan5g0734 5 18698387 18705083 PCT