Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0635 ATGGACCTCATTCTCCAATCTAGGTCAAACCCACTTCTAGTTTCATCATCACCACTCACCCCAACCTCTCAAAATCCAATCTTTTTCACACCCCACTACCGCACAACCACAACAAGAAAGCTCAAGTTCCGAGCTTCAGCTTCCGCAGACCCAAATGGGGCTCCCTGGCTTGACATTTCCGAATCGCTGCAGCGTGGTTCGAGGCGGTTTTGGTTGAAGTTTGGGGAGATGGTAAAGAAGGAAGCAGGTTTTGACTTGGAAGATTTTGGTAATGTTAGTAAGGTTGGCGAGGTTGTTGATGGAGTGAAGGCACGTGGAGATGAATTTGGAAGGTTTGGGAGTAATTGGGTATCTGAGTTTGTGGATTGGAACCGTTGGGAACGTTGGAAGAATATTAAGAACTGGGAACCTAAGCGAATCGGAGCATTAGTTCTTTATATATTTGTTGTGGCATTTACTTGTAGAGGAATATACATAGCAATTCAAGCACCTTATCTGAATCGCCAGAAAAAAGAATTGACAGAAGCTTACATGGAAGCATTAATTCCTGAGCCATCCCCCAGTAACATTAGAAGATTTAAGAAGGGTATATGGAAGAAGACGACACCAAAAGGCCTGAAAATGAAAAAGTTTATTGAAGGACCTGATGGAACTCTTGTTCATGATAATTCTTATGTTGGAGAGGATGCATGGGAGGATGATCTAGAGGCTCCTGAGGAACATGTAAAAAAAATTATAGAGGATGATGAAAGACTAAAGAAAGAAGAGAAGAAAGAACTAACAAAAGGCTTGGGCATTTCAGGTGAAGTTCAAACTGAGAGCACATGGCGTGAGAGGCTTCATAAATGGAGAGAAACCCTTAGAAAAGAACGTCTAGTTGAACAAATGGATTCCTCAAATTCCAAATACGTAGTTGAATTTGACATGAAAGAGGTGGAAAATAGTCTTCGCAAGGATGTGGCAGAAAAGGTGACAGGTACTGAGGGAACTAGGGCTCTGTGGATAGCTAAGAGATGGTGGCACTATCGTCCTAAACTCCCTTACAATTATTTTCTTGATAAACTTGATAGTTCTGAGGTAGAAGCTATTGTGTTTACTGAAGACTTAAAAAGATTGTATGTGACAATGAAAGAAGGTTTTCCACTGGAGTTTGTGGTTGATATCCCTCTTGATCCTTATCTGTTTGAGATGATTACAAGTTCTGGAGCTGAAGTAGATCTTCTTCAGAAGAAACAGATCCATTATTTTATGAAAGTTGTCATTGCATTGTTACCTGGAATACTAATTCTCTGGCTTATAAGGGAGTCTGTGATGCTTCTGCACATCACCTCCAGCCGTTTTCTTTACAAAAAGTATAACCAACTCTTTGATATGGCTTATGCAGAAAATTTCATCATGCCAGTTGGAGATGTTGGTGAAACAAAATCTATGTACAAGGAAGTTGTGTTAGGGGGTGATGTTTGGGATCTTCTTGATGAGTTGATGATCTATATGGGAAATCCTATGCAGTTCTATGAAAAGGGTGTTCAGTTCGTGCGGGGTGTTCTACTCTCTGGACCTCCAGGAACAGGAAAAACACTTTTTGCCAGGACACTTGCAAAAGAAGGTGGATTGCCTTTTGTTTTTGCTTCTGGTGCGGAGTTCACAGATAGTGAAAAAAGTGGAGCAGCTAGGATCAATGAGATGTTTTCCATTGCTAGGAGAAATGCACCTTGTTTTGTCTTTGTGGATGAAATAGATGCTATTGCTGGAAGACATGCTAGGAAGGATCCACGAAGAAGGGCAACTTTTGAGGCTCTTATTGCACAGCTTGATGGGGACAAGGAAAAAACGGGTATTGACCGTCTCTCCCTCAGACAAGCTGTCATATTCATATGTGCCACAAATAGGCCCGATGAATTAGATCTTGAATTTGTTCGTCCTGGGCGTATAGATCGTCGTCTTTACATTGGTTTGCCTGATGCCAAGCAAAGAGTTCAAATTTTTGGCGTGCATAGTTCTGGAAAGCAACTTGCAGAGGATGTGAATTTTGAAAAGCTTGTCTTCCGTACTGTTGGATTCTCAGGAGCAGATCTTAGAAACCTTGTCAACGAAGCAGCAATAATGTCGGTGAGAAAAGGGCATTCCAAAATTTTCCAGGAAGACATTATTGATGTATTAGATAAACAACTGCTTGAGGGTATGGGTGTCCTTCTAACTGAGGAAGAGCAACAGAAATGTGAAGAAAGTGTATCTTTTGAAAAGAGGAGACTTCTTGCTGTCCATGAAGCTGGTCATGTGGTGTTAGCTCACTTATTTCCTCGGTTTGACTGGCATGCATTTTCACAGCTCCTGCCAGGTGGCAAGGAAACTGCAATATCTGTATTCTACCCTCGAGAAGATATGGTTGACCAAGGTTATACAACCTTTGGTTACATGAGGATGCAAATGGTAGTGGCTCATGGTGGCCGATGTGCTGAACGTGTTGTATTTGGTGATGATATAACTGATGGAGGGAGAGATGATCTAGAAAAGATAACAAAGATTGCTAGGGAGATGGTAATCAGCCCTCAAAATCCAAGGTTGGGATTATTGGGTTTAACAAAAAGGATTGGCTTAGATGATCGACCAGACAGTTCAGACGGCGAGTTGATAAGATATAGATGGGACGATCCTCAAGTTATTCCTGCCAATATGACACTAGAGATGTCTGAGCTCTTTTCACGGGAGTTGACAAGGTACATTGAAGAAACAGAAGAACTTGCAATGAATGCTTTGAGGGATAATAGGCATATCCTGGACTTGGTTGCAAGGGAACTGCTGGAGAGATCAAGAATAACTGGATTGGAAGTTGGAGAAAAATTGAAGGGATTGTCGCCAGTAATGTTTGAGGACTTTGTGAAGCCCTTCCAGTTAAACGTAGAACAGGACGGACCATTCCCACATAATGATCGTGTGCGATATCAGCCTCCGGATTTATATCCTGCTCCTCTCCATCGATGTTGA 2985 0.4184 MDLILQSRSNPLLVSSSPLTPTSQNPIFFTPHYRTTTTRKLKFRASASADPNGAPWLDISESLQRGSRRFWLKFGEMVKKEAGFDLEDFGNVSKVGEVVDGVKARGDEFGRFGSNWVSEFVDWNRWERWKNIKNWEPKRIGALVLYIFVVAFTCRGIYIAIQAPYLNRQKKELTEAYMEALIPEPSPSNIRRFKKGIWKKTTPKGLKMKKFIEGPDGTLVHDNSYVGEDAWEDDLEAPEEHVKKIIEDDERLKKEEKKELTKGLGISGEVQTESTWRERLHKWRETLRKERLVEQMDSSNSKYVVEFDMKEVENSLRKDVAEKVTGTEGTRALWIAKRWWHYRPKLPYNYFLDKLDSSEVEAIVFTEDLKRLYVTMKEGFPLEFVVDIPLDPYLFEMITSSGAEVDLLQKKQIHYFMKVVIALLPGILILWLIRESVMLLHITSSRFLYKKYNQLFDMAYAENFIMPVGDVGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQFYEKGVQFVRGVLLSGPPGTGKTLFARTLAKEGGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKEKTGIDRLSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFGVHSSGKQLAEDVNFEKLVFRTVGFSGADLRNLVNEAAIMSVRKGHSKIFQEDIIDVLDKQLLEGMGVLLTEEEQQKCEESVSFEKRRLLAVHEAGHVVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDMVDQGYTTFGYMRMQMVVAHGGRCAERVVFGDDITDGGRDDLEKITKIAREMVISPQNPRLGLLGLTKRIGLDDRPDSSDGELIRYRWDDPQVIPANMTLEMSELFSRELTRYIEETEELAMNALRDNRHILDLVARELLERSRITGLEVGEKLKGLSPVMFEDFVKPFQLNVEQDGPFPHNDRVRYQPPDLYPAPLHRC* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0635 994 Pfam AAA+ lid domain 674 716 IPR041569 -
Lan13g0635 994 Pfam Peptidase family M41 744 943 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Lan13g0635 994 Gene3D Peptidase M41 737 951 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Lan13g0635 994 CDD AAA 513 652 - -
Lan13g0635 994 SMART AAA_5 511 654 IPR003593 -
Lan13g0635 994 SUPERFAMILY FtsH protease domain-like 747 957 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Lan13g0635 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 722 IPR027417 -
Lan13g0635 994 Gene3D - 472 653 IPR027417 -
Lan13g0635 994 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 12 994 - -
Lan13g0635 994 Pfam ATPase family associated with various cellular activities (AAA) 515 651 IPR003959 GO:0005524|GO:0016887
Lan13g0635 994 PANTHER ATP-DEPENDENT PROTEASE 12 994 - -
Lan13g0635 994 Gene3D - 654 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0635 Lan-Chr13 5325491 5338910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0635 478 944 Miscellaneous Gene Families AT5G53170 30.085 1.46e-56 208