Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0631 ATGGCGACAAGAGCAGCTTGCAATCACCTTCACCTATTTCCCAGTTTGGTCCATCCTTTGAAATCAACCCTTTCCACTAAACACACTCTTTTCACTTCAAACTCTCCCCTTTATTCCATTCACAGAAACTTCTCTTCTTCTTCTTCTTCATCCAAGATAAGCATGAGCCTCAAAGCTGGTATCGTTGGCCTCCCCAACGTTGGCAAGTCCACTCTCTTCAATGCCGTTGTCGAAAATGGAAAGGCTCAAGCTGCTAATTTTCCTTTTTGTACAATAGAGCCAAATGTTGGAATCGTTGCTGTTCCAGATCATCGTCTCAATGTGCTTTCTGAACTCACTAAATCTCAACGAACAGTTCCAGCATCCATAGAATTTGTAGATATTGCTGGGCTTGTCAAGGGTGCTAGTCAAGGCGAGGGTCTTGGTAATAAATTTTTGCAACATATTCGTGAGGTGGACTCTATACTTCAGGTTGTACGGTGTTTTGATGACAATGACATTATTCACGTGAATGGGAAAGTTGATCCAAAGTCTGATATTGATGTTATCAACTTGGAGCTTGTTTTCACAGACTTGGACCAGATTGAAAAAAGAATAGAGAAATTAAAGAAAAGCAAGGTGAAGGATTCACAATCTAAAGTTAAGGAAGAGGCAGAAAAATCTGCATTGGAGAAGATTCGTGGGGCACTCTTGGACGGAAAACCTGCACGATCTGTGACCTTAACAGATTATGAAAGGGATGCTGTTAAGCATCTCTACTTGCTCACCATGAAACCTGTTACATATGTGGCAAATGTTGCTGAATCTGATCTAGCTGATCCTTCAAGCAATCATTATGTCAAGGAAGTCGCAGATGCTGCATCGCAGCTGCAGTCAGGAATTGTTACAGTTTCAGCGCAGGTTGAGGCAGAGCTTAGTGAACTACCAATTGAAGAAAGACAAGAATATTTGAAATCTCTTGGTGTCAGTGAAAGTGGTCTCGGGAACCTGATCAGAGCAACCTATGGCCTTTTGGGGCTTCGAACTTATTTTACAGCTGGTGAAAAGGAGACAAGGGCTTGGACAATACTTGCAGGAATGACTGCGCCTCAAGCTGCTGGAGTTATTCACTCTGACTTCGAGAAGGGATTCATTCGAGCAGAGACAGTGGCTTATGATGACTTTGTTGCTGCTGGTTCACTTGCTTCAGCGCGAGAGAAAGGAATTTTGAGATCTGAGGGTAAAGAATACATTGTACAAGAAGGAGATGTCATGTTGTTTAGATTCAATGTTTAG 1275 0.4235 MATRAACNHLHLFPSLVHPLKSTLSTKHTLFTSNSPLYSIHRNFSSSSSSSKISMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDHRLNVLSELTKSQRTVPASIEFVDIAGLVKGASQGEGLGNKFLQHIREVDSILQVVRCFDDNDIIHVNGKVDPKSDIDVINLELVFTDLDQIEKRIEKLKKSKVKDSQSKVKEEAEKSALEKIRGALLDGKPARSVTLTDYERDAVKHLYLLTMKPVTYVANVAESDLADPSSNHYVKEVADAASQLQSGIVTVSAQVEAELSELPIEERQEYLKSLGVSESGLGNLIRATYGLLGLRTYFTAGEKETRAWTILAGMTAPQAAGVIHSDFEKGFIRAETVAYDDFVAAGSLASAREKGILRSEGKEYIVQEGDVMLFRFNV* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0631 424 Coils Coil 185 212 - -
Lan13g0631 424 PRINTS GTP1/OBG GTP-binding protein family signature 59 79 IPR006073 GO:0005525
Lan13g0631 424 PRINTS GTP1/OBG GTP-binding protein family signature 81 99 IPR006073 GO:0005525
Lan13g0631 424 PRINTS GTP1/OBG GTP-binding protein family signature 125 140 IPR006073 GO:0005525
Lan13g0631 424 PRINTS GTP1/OBG GTP-binding protein family signature 142 160 IPR006073 GO:0005525
Lan13g0631 424 Pfam Protein of unknown function (DUF933) 340 423 IPR013029 -
Lan13g0631 424 SUPERFAMILY TGS-like 340 421 IPR012676 -
Lan13g0631 424 Gene3D - 103 423 IPR012675 -
Lan13g0631 424 CDD TGS_YchF_OLA1 338 422 IPR013029 -
Lan13g0631 424 Pfam 50S ribosome-binding GTPase 59 171 IPR006073 GO:0005525
Lan13g0631 424 Gene3D - 57 339 IPR027417 -
Lan13g0631 424 Hamap Ribosome-binding ATPase YchF [ychF]. 56 424 IPR004396 GO:0005524|GO:0005525|GO:0016887
Lan13g0631 424 PANTHER OBG GTPASE FAMILY 55 424 - -
Lan13g0631 424 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 57 339 IPR031167 GO:0005525
Lan13g0631 424 Gene3D - 168 258 IPR023192 -
Lan13g0631 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 362 IPR027417 -
Lan13g0631 424 CDD YchF 59 338 IPR041706 -
Lan13g0631 424 TIGRFAM TIGR00092: GTP-binding protein YchF 55 424 IPR004396 GO:0005524|GO:0005525|GO:0016887
Lan13g0631 424 PANTHER OBG-LIKE ATPASE 1 55 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0631 Lan-Chr13 5296806 5303199 Transposed