Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0611 ATGCCTGGGAATAAGTATAACGGTCATTTGAATCATCGCATTCCAGGTCGTGTTGAACGGCTTTTAAGAAATAGAGAGTTAAGAAAAAGCAGTAGGGGTAGCCATTTGAATGAGAATGAGCAGCGGATAAGAGAAGACGATGATTTTTATGATGGTGAATGTTTTATTGATGGGGCCAAAGCAGCAAGGATGCTTGCTGAGATGTGTCAAAGGCAAGGTGTTAAACAAAGGCTTTTGGTCGTGGCTAATAGGCTGCCCGTCTCGGCGGTTAGGAAAGGTGAGGATTCTTGGTCTTTGGAGATAAGTGCAGGTGGCCTGGTGAGCGCACTTTTAGGTGTGAAGGAGTTTGAGACAAGGTGGATAGGTTGGGCCGGTGTTAATGTGCCAGATGAGATTGGACAGGAGGCACTTACTAAAGCATTGGCTGAAAAGAGGTGTATCCCTGTATTTCTGGATGAAGAAATTGTTCACCAATATTATAATGGCTATTGCAACAACATCTTGTGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGATCGCCTTGCCACCACGCGTAGTTTCCAGTCTCAGTTTGCGGCATATGAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAATGAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTTCTTCCAAAATGCTTAAAGAAATATAACAGCAACATGAAAGTTGGATGGTTTCTCCACACCCCATTTCCATCTTCTGAAATTCATAGGACACTGCCTTCTCGTTCAGAACTCCTGCATTCTGTTCTTGCAGCCGATTTAGTTGGTTTTCACACCTACGATTATGCACGGCATTTTGTTAGTGCTTGTACTCGTATCCTTGGACTTGAGGGTACACCTGATGGGGTTGAGTATCAAGGGAAGCTGACTCGAGTTGCTGCATTTCCAATTGGGATAGATTCGGAACGATTTATACGTGCACTTGACCTTCCTCCAGTCCAGGATCACGTCAAAGATTTACAAGAAAGATTTAAGGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAACTTCTAGCCTTTGAAAAATTCTTGGAAGAGAATGTTTATTGGCGTGATAAAGTTGTTTTGCTTCAAATCGCTGTGCCAACCAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGCAGATTCGGAACATTGACTGCTGTTCCTATACATCATCTGGATCGCTCCCTTGACTTTCATGCACTATGTGCATTGTACGCTGTTACTGACGTAGCACTGGTCACATCCTTGAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTCAGTGAATTTGCTGGCGCAGCACAATCTCTTGGTGCTGGGGCAATTCTAGTAAATCCATGGAACATCACAGAAGTTGCTGATGCAATTGGCAAGGCTCTAAATATGCCATCCGCGGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTAAAATCTCATACTGCTCAGGAATGGGCTGCAACTTTTGTTAGCGAACTAAATGATACTGTTATCGAGGCACAACTAAGGACAAGGCAAGTTCCACCCAGGCTTCCAACCAAGACTGCAATTGAACATTATCTGCAGTCAACTAATCGATTGGTCATTTTGGGATTCAGTGGGACATTAACTGAACCAGTCGAAAAAACAGGTGATCAGATTAAAGAAATGGAACTCAAGGTGCATCCACTATTGAAACAACCCTTGACAGCCCTTTGCAGTGATCCAAATACCACAGTTGTTGTGCTCAGTGGAAGTGGCAGAAAAGTCTTAGATGAAAACTTTGAAGAATATGGGATGTGGCTGGCGGCAGAGAACGGGATGTTTTTACATCCCTCAATGGGAGAATGGATGACGACAATGCCGGAGCATCTGACTATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACGCCCAGATCACATTTTGATTTTGAAGAAAGGGAAACTTCACTTGTATGGAATTACAAATATTCAGATGTTGAGTTCGGAAGACTTCAAGCACGGGACATGCTGCAACATCTTTGGGCAGGTCCAATTTCTAATGCTTCAGTTGATGTTGTTCACGGGAGTCGATGTATCGAGGTCCGAGCTGTTGGTGTCACAAAGGGAGCAGCTATTGATCGGATCCTGGGCGAGATAGTCCACAGTAAATCCATGACATCACCAATTGATTATGTTCTGTGTATAGGACATTTTCTGGGGAAGGATGAAGATGTTTACGCCTTTTTTGAGCCAGATCTTCCTTCTATCGGCGTGTATCATCCACGATCTATGGTAACAGATGGAGTAAAGTATCCTACTGAAAGGAAACCCTCTTTGAAGACCTCAAATATTAAAATTGCAACAAAATCATCACAAAACAAGGCACAAAAGCCATTGTCAAATTCTGAGAAGAAAACAAGCAATCATGCATGCAATAACACACCAAGAAGGCCAACTCCAGAAAGGGTATCATGGAACGTGCTTGATCTTAAGAAGGAGAATTACTTTTCTTGTGCAGTCGGCCGAACTCGAACGAATGCTCGGTATACACTTGGATCATCGGATGATGTCGTTGCATTTCTGATGGAACTAGTGGATGCATCTTCAAATTCTTCACAATTGAGTTAA 2754 0.4285 MPGNKYNGHLNHRIPGRVERLLRNRELRKSSRGSHLNENEQRIREDDDFYDGECFIDGAKAARMLAEMCQRQGVKQRLLVVANRLPVSAVRKGEDSWSLEISAGGLVSALLGVKEFETRWIGWAGVNVPDEIGQEALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYEKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKKYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPDGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQDHVKDLQERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENVYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVADAIGKALNMPSAEREKRHKHNFLHVKSHTAQEWAATFVSELNDTVIEAQLRTRQVPPRLPTKTAIEHYLQSTNRLVILGFSGTLTEPVEKTGDQIKEMELKVHPLLKQPLTALCSDPNTTVVVLSGSGRKVLDENFEEYGMWLAAENGMFLHPSMGEWMTTMPEHLTMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYSDVEFGRLQARDMLQHLWAGPISNASVDVVHGSRCIEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDVYAFFEPDLPSIGVYHPRSMVTDGVKYPTERKPSLKTSNIKIATKSSQNKAQKPLSNSEKKTSNHACNNTPRRPTPERVSWNVLDLKKENYFSCAVGRTRTNARYTLGSSDDVVAFLMELVDASSNSSQLS* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0611 917 Gene3D Glycogen Phosphorylase B; 69 323 - -
Lan13g0611 917 Gene3D - 664 746 - -
Lan13g0611 917 MobiDBLite consensus disorder prediction 818 862 - -
Lan13g0611 917 CDD HAD_TPP 575 794 - -
Lan13g0611 917 MobiDBLite consensus disorder prediction 811 864 - -
Lan13g0611 917 Pfam Trehalose-phosphatase 596 795 IPR003337 GO:0003824|GO:0005992
Lan13g0611 917 SUPERFAMILY HAD-like 574 906 IPR036412 -
Lan13g0611 917 Gene3D - 578 778 IPR023214 -
Lan13g0611 917 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 906 IPR001830 GO:0003824|GO:0005992
Lan13g0611 917 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 906 - -
Lan13g0611 917 CDD GT20_TPS 77 542 IPR001830 GO:0003824|GO:0005992
Lan13g0611 917 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 77 542 IPR012766 GO:0003825|GO:0005992
Lan13g0611 917 Pfam Glycosyltransferase family 20 77 542 IPR001830 GO:0003824|GO:0005992
Lan13g0611 917 Gene3D Glycogen Phosphorylase B; 324 527 - -
Lan13g0611 917 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0611 Lan-Chr13 4991800 5002817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0611 1 912 Trehalose Biosynthesis Gene Families AT1G78580 76.907 0.0 1458