Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0834 ATGGGTTTCTCCTCTCTCCACGTCTGCATGGATTCATCAGATCATTGGTTGCAGGGCACAATTCAGGAGGAGTCCAAGTTAGATTCTTCAACTTCATCATCTGCAGCAGACATGCTTACATGCTCAGGACCCATGATGGACATGGATCAAAGGAAGCTAAGACCTCCAAAAGACCAAGCACTCAAGTGCCCAAGGTGTGATTCAACTCACACCAAGTTCTGCTACTACAATAACTACAGTCTCACCCAGCCTAGGTACTTCTGCAAGACTTGTAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATCCCTGTTGGTGGTGGCTGTAGAAAGAACAAGAAAGTTTCCAATTCCAAGAAACCCAATAATAATGACCAATCACCTATTACTCAAAACCAACCACATCAAGGACTAGTGCCTAATTCTTACCATCTCAACCCCAAAGAATGTTTTCAACTTCCTTTCCAAGCTGATGTGCAATTTTCTCACCTCAATGATTTCTTTGGGGCTAATGCTGGGACACTCGGAAACCCTAATTTTATGGAGAACCCTAAGCCTAACATTTCTAGGAATTTTGATTTTTTTGGGAATAATGATCATATGGGTGTGGTAGGTCTTGGGCTCGGAGATCATGCAAATAGTTACAATGGGTTGTTACCAACAAATTATCAAGGTCTTTCCTTTGGAGGAATGTCCCTTGATGGGAATAATGGTGGAACTAATTACTTAATGGAAACGTGTCAGAGATTGATGCTGCCTTATGAGTCAGGTGATCTTGGCCAAACTGGTTCAATTGATGATGTGAAGCCAAACCCTAAGGTATTGTCCCTTGAATGGCACAACCAGGGTTACTCAGTTCCTGAATATACTAACGGTTCAGGATCATGGAGTGGCATGATGAACGGCTATGGATCTTCCACAACAAACCCTTTGGTCTAG 942 0.431 MGFSSLHVCMDSSDHWLQGTIQEESKLDSSTSSSAADMLTCSGPMMDMDQRKLRPPKDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSNSKKPNNNDQSPITQNQPHQGLVPNSYHLNPKECFQLPFQADVQFSHLNDFFGANAGTLGNPNFMENPKPNISRNFDFFGNNDHMGVVGLGLGDHANSYNGLLPTNYQGLSFGGMSLDGNNGGTNYLMETCQRLMLPYESGDLGQTGSIDDVKPNPKVLSLEWHNQGYSVPEYTNGSGSWSGMMNGYGSSTTNPLV* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0834 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 305 IPR045174 GO:0003700|GO:0006355
Lan12g0834 313 ProSitePatterns Zinc finger Dof-type signature. 63 99 IPR003851 GO:0003677|GO:0006355
Lan12g0834 313 MobiDBLite consensus disorder prediction 120 141 - -
Lan12g0834 313 ProSiteProfiles Zinc finger Dof-type profile. 61 115 IPR003851 GO:0003677|GO:0006355
Lan12g0834 313 PANTHER DOF ZINC FINGER PROTEIN DOF5.6-LIKE 18 305 - -
Lan12g0834 313 Pfam Dof domain, zinc finger 58 115 IPR003851 GO:0003677|GO:0006355
Lan12g0834 313 MobiDBLite consensus disorder prediction 106 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0834 Lan-Chr12 15438864 15440743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0834 1 313 C2C2-Dof Transcription Factor Family AT5G62940 40.633 8.87e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan12g0834 zf-Dof 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0834 - - lang:109363070 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0834 12 15438864 15440743 Lan1g1412 1 23875223 23877044 LSH
Lan12g0834 12 15438864 15440743 Lan14g0318 14 6180926 6183228 PCT
Lan14g0318 14 6180926 6183228 Lan12g0834 12 15438864 15440743 PCT