Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0511 ATGGGTCAAGAGAAAGATAGTGAAGGGATTAAGCTGTTTGGCACTACAATTACGTTGCATGGTAAACAAAAAAGCGAAGATAAGAAAGAAAGTGAATGTGAGAAAGAGAAGAAAAAAGTTGATAAGGTCATGGTTTGCCCTAGATGCAAGAGCATGGAGACAAAGTTTTGTTACTTCAATAACTACAACGTTAATCAGCCTAGGCACTTTTGCAAAGGTTGCCAAAGGTACTGGACTGCTGGTGGCGCCCTCCGCAACGTACCTATCGGGGCAGGCCGCCGAAAGGCAAAACCACCAGGTGGTTTTCTGGACAGTGGATTTTACGAAGAATCCACTGTCCAAAAGTTTGGTGTTCATGAGGGTTTGATTTTGGAGGAGTGGAAAGTTGCCACCGTGGACCACCATGATTACCGGCAGCTATATCCATCTAAACGGCAGAGGATCAGTTCAAGTGGTACTGGTCAACCTTGTTAA 474 0.4473 MGQEKDSEGIKLFGTTITLHGKQKSEDKKESECEKEKKKVDKVMVCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPGGFLDSGFYEESTVQKFGVHEGLILEEWKVATVDHHDYRQLYPSKRQRISSSGTGQPC* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0511 157 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Lan12g0511 157 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 5 152 - -
Lan12g0511 157 PANTHER CYCLIC DOF FACTOR 2 5 152 IPR045174 GO:0003700|GO:0006355
Lan12g0511 157 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
Lan12g0511 157 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0511 Lan-Chr12 11777708 11778491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0511 5 152 C2C2-Dof Transcription Factor Family AT2G34140 50.000 4.70e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan12g0511 zf-Dof 4.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0511 - - vra:106779806 202.986