Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1767 ATGGTTTATACTTCCATCCCAGCTTATAATATTGATCCTGCTAACTGGCAGCAACAGCAACCAAATCATCAAATTGGCAACAATAGTGCCAGCTCACATCTTCTTCCACCACCACCTCCGCCATCATCTCAGCCTAATGGAGCTGGCAACACCAGCTCCATCAGGCCTGGCTCGATGGCGGATAGGGCTAGGATGGCCAATATACCTATGCAAGAGATACCACAAAAATGTCCAAGATGTGAATCTACCAACACCAAATTTTGCTACTTCAATAACTACAGCCTCTCTCAGCCCCGCCACTTCTGCAAGACCTGCAGAAGGTACTGGACACGTGGCGGGGCCTTGAGAACCGTCCCCGTTGGCGGCGGCTGTAGGAGGAACAAGAGAAGCAAAGGAAGCAGCAGCAACAACAACAGCTCGATGTCCTCGCCGGCGAGTTCGGATCGACAGACACTCAGTGCCAACTCCAACAACTCAATCTCCTCTTCTGACATGGTAGGCCTTGGGCCTCCGGTGCCGCCACCGTTTAGATTCATGTCTCCATTGCATCAACTTGGTGATAACTTTGCAAGTGGTGGAGATATAAGCTTAAACTATGGCATGAACTATGGCAACATTCCAAGTCAAATGGGAGGAGTAGGAGTAGGAGACTTGAATTTTCACATGGGAAATGCTTTAGGCCATGGTGGCGGCCGTGGAGGTGGCGGTGGTTCTATCTTATCTGCAGCTGGTTTGGAGCAATGGAGGGTGCCACAAACACACCAATTTCCTTTCTTGACTGGTTTGGAAGCTTCATCACATGGCTTGTACCACCAATTTGAAGGTACTAGTACTAATCCGACCACCGGATACGGTGATGTCCGGCCGAAGGCATCGACTTCCAGTGTGATATCTCAGATGGCTTCAGTTAAAATGGAAGAGAGTGGTCAACAACTTAATTTGTCAAGAGAGTTTTTGGGAATGAATAGTTCAGCTAGTGGGCAATATTGGAATACTAGTGATGTTGGTGGTTCTACAGCACCAGCTTGGACAAATCTTTCTGGCTTTAGCTCTACTAGTAATCAACTATAG 1071 0.4809 MVYTSIPAYNIDPANWQQQQPNHQIGNNSASSHLLPPPPPPSSQPNGAGNTSSIRPGSMADRARMANIPMQEIPQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRTVPVGGGCRRNKRSKGSSSNNNSSMSSPASSDRQTLSANSNNSISSSDMVGLGPPVPPPFRFMSPLHQLGDNFASGGDISLNYGMNYGNIPSQMGGVGVGDLNFHMGNALGHGGGRGGGGGSILSAAGLEQWRVPQTHQFPFLTGLEASSHGLYHQFEGTSTNPTTGYGDVRPKASTSSVISQMASVKMEESGQQLNLSREFLGMNSSASGQYWNTSDVGGSTAPAWTNLSGFSSTSNQL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1767 356 ProSiteProfiles Zinc finger Dof-type profile. 75 129 IPR003851 GO:0003677|GO:0006355
Lan11g1767 356 MobiDBLite consensus disorder prediction 13 32 - -
Lan11g1767 356 MobiDBLite consensus disorder prediction 128 165 - -
Lan11g1767 356 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 12 354 - -
Lan11g1767 356 MobiDBLite consensus disorder prediction 116 167 - -
Lan11g1767 356 ProSitePatterns Zinc finger Dof-type signature. 77 113 IPR003851 GO:0003677|GO:0006355
Lan11g1767 356 Pfam Dof domain, zinc finger 75 129 IPR003851 GO:0003677|GO:0006355
Lan11g1767 356 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 354 IPR045174 GO:0003700|GO:0006355
Lan11g1767 356 MobiDBLite consensus disorder prediction 13 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1767 Lan-Chr11 34331181 34332801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1767 1 267 C2C2-Dof Transcription Factor Family AT2G37590 42.466 2.04e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan11g1767 zf-Dof 2.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1767 - - gmx:100796820 363.614