Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1029 ATGGGTACTCTTCAATCTTGGAGAAAAGCTTATGGTGCTCTCAAAGACACTACCAAAGTTGGTCTTGCTCATGTCAATAGCGATTACGCGGATTTGGATGTTGCTATAGTGAAAGCTACTAATCATGTTGAGTGTCCTCCAAAAGAGAGACACCTTAGAAAAATTCATTTTGCTGTTGGTGCTGTACAACCCAGAGCTGATGTTGCTTACTGCATTCATTCTCTTGCTCGTCGATTGGCCAAGACGCGAAATTGGACAGTGGCACTGAAAACACTGATAGTCATCCATAGGTTGCTGAGGGAAAGCGATCCTACTTTTAGAGAAGAACTTCTTAATTTTTCACAGAGGGGACGCATTCTCCAACTTTCTAATTTCAAGGATGATTCTAGTCCAATTGCTTGGGATTGCTCTGCCTGGGTACGTACTTATGCATTCTTTTTGGAAGAAAGACTTGAATGTTTCCGGATTCTGAAGTATGATATTGAAGCTGAGCGTCTACCGAAGTCTGCCCCAGGGCAGGAAAAGGGACGCAGCAGGACCAGGGATTTGGATAGCGAGGAGCTATTGGAGCAGTTACCTGCTTTGCAGAAGCTGCTTTATCGCCTTGTTGGTTGCCGGCCGGAAGGTGCAGCTTTTAGCAACCATGTGATACAATATGCCCTGGCTCTGGTATTAAAAGAAAGCTTTAAGATCTATTGTGCTATTAATGACGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGTCCAGACATGAAGCTATTAAAGCCCTTGATGTATATAAACGTGCGGGTCAGCAGGCAGCAAATCTCTCTGATTTCTATGAAAGCTGCAAAGGGTTGGAACTTGCTAGGAATTTTCAGTTTCCCGTCTTACGAGAGCCTCCACAATCTTTTCTTACAACCATGGAGGACTACATAAGGGAGGCACCACGAGTAGTTACTGTTCCAACTGAGCCATTGTTGCAGTTGACTTATAGACCCGAAGAAGATGTTCTCACAATTGAAGACACTAAATCATCTGTTGAAGAACAGGAGCCATCAGTGACTGTTGATGATGTTATTGTCTCTAAGTCTGAGCCTCCTCCTGCTGCTCCTCCTCCACCACCTTCTCACAACAATTTTGAAACCGGAGACTTACTGGGGTTGAATGAAATTACTTTTGATGCTTCATCAATAGAAGAAAGAAACGCTCTTGCCTTAGCCATTGTCCCCACCGAAACTGGCACAGCATCAAGTGCTGCTCAAGCAAAAGATTTTGATCCATCCGGATGGGAGCTTGCACTGGTTACCACTCCAAGTACCAATATTTCTTCAGTCAATGAGAGACAATGGGCTGGTGGATTGGATTCTCTCACCCTTAACAGCTTATACGACGAAGGAGCATATCGATCTGCACAGCAACCGGTTTACGGAGCACCAACCCCATATCCATTTGGAGTGCAAGATCCTTTTGCTTCATCAAGCAACATCCCTCCTCCATCGAATGTCCAAATGGCAGCAATGGCGCAACAACAGCAAGTAAATTCATTCGGTCCTTACCAACCTTATCAGCTACAACAACCACATATGATGATGAACCCAGCAAACCCTTTTGGAGATGCAGGATATGGGGCATTTCCTGTGAATTCAGTTTCTCACCCACAGCATAATAACCCATTTGGAAGCACTGGTTTGTTATAA 1683 0.4409 MGTLQSWRKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKIHFAVGAVQPRADVAYCIHSLARRLAKTRNWTVALKTLIVIHRLLRESDPTFREELLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYAFFLEERLECFRILKYDIEAERLPKSAPGQEKGRSRTRDLDSEELLEQLPALQKLLYRLVGCRPEGAAFSNHVIQYALALVLKESFKIYCAINDGIINLVDKFFEMSRHEAIKALDVYKRAGQQAANLSDFYESCKGLELARNFQFPVLREPPQSFLTTMEDYIREAPRVVTVPTEPLLQLTYRPEEDVLTIEDTKSSVEEQEPSVTVDDVIVSKSEPPPAAPPPPPSHNNFETGDLLGLNEITFDASSIEERNALALAIVPTETGTASSAAQAKDFDPSGWELALVTTPSTNISSVNERQWAGGLDSLTLNSLYDEGAYRSAQQPVYGAPTPYPFGVQDPFASSSNIPPPSNVQMAAMAQQQQVNSFGPYQPYQLQQPHMMMNPANPFGDAGYGAFPVNSVSHPQHNNPFGSTGLL* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1029 560 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 543 IPR045192 GO:0048268|GO:0072583
Lan11g1029 560 SUPERFAMILY GAT-like domain 178 309 - -
Lan11g1029 560 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Lan11g1029 560 PANTHER OS05G0549000 PROTEIN 1 543 - -
Lan11g1029 560 MobiDBLite consensus disorder prediction 357 378 - -
Lan11g1029 560 SMART enth_2 30 161 IPR013809 -
Lan11g1029 560 Gene3D ANTH domain 173 324 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lan11g1029 560 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Lan11g1029 560 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Lan11g1029 560 Gene3D - 7 161 IPR008942 -
Lan11g1029 560 CDD ANTH_N 32 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1029 Lan-Chr11 11851595 11859687 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1029 11 11851595 11859687 Lan11g1029 11 11851595 11859687 ECH