Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1027 ATGTTGGCTTCAACTATTCCTCTAACACCATCTACCTCAAACCTTAACCTTTCACATTTCTTCACAACACATGCTCCACCAGAATTTCTTCAAAGAAACCCCAAAAGTAGAGTGACCCTTTTTTCCAAATCAAATTCCAAACTTGTTGTGGTTGCCAGGGTCAATAGTAACGGTCGTGATGGCGCCATTGATGCTACTTCTCAACAACAACAACAACAAGAGTCTTCACCACCTCCTGGCATTGATACTGTGAACAGTACATCTTCTGGCCTCGGTGATGGTTATGTAGCCTTATTTGTTCGAATGTTAGGCCTAGATCATGATCCCCTGGATAGAGAACAAGCTGTAGATACTCTATGGAAATATTCACTTGGTGGAAAGAAGTGTATTGACACTTTAATGCAGTTTCCTGGTTGTATTAATCTGATTGTGAACCTCCTTAGATCAGAGTCTAATTCCGCTTGTGAGGCCGCTGCTGGCCTTCTGCGATCACTGTCTTCAGTCAATATATATAGGAATCATGTAGCCGATAGTGGAGCAATAGAAGAGATAAATAGATTGCTGAGGCAACCTTCCTTGGCTTCCGAGGTAAAGGAGCAGAGTTTGAGTACACTGTGGAATTTATCTTTTGATGAGAAGCTTTGCACTAAAATTGCAAATAGTGATATTCTATTGCTAACTATTAAGTATCTCGATGATGAGGATATAAAAGTGAAGGAAGCTGCAGGGGGCATCTTGGCAAATTTAGCATTGAGCCGTGTTAACCATAATATCATGGTTGAAGCAGGTGTTATTCCAAAATTGGCAAAGTTCTTAACATCTAATTCGGAAGGATCTAAAGTCATTAAAAAGGAGGCAAAGAATGCATTATTGGAACTTGTTAAGGATGAGTATTATAGAATTCTTGTTATTGAGGAAGGTCTGGTTCCTGTGCCACTAGTTGGTGCTGCAGCCTATAAGTCATTCACTCCAAGTTTACATTTGTGGCCCACATTACCAGATGGTTCAGAAATTGAAAGAACTTCCAGAAAACCTTCCAGATTTGGTGCATCAGAGTTACTTCTTGGATTAAATATAAATGACAAGAATGCTAACATAGAGGAAGCAAAAGCCAATGCAATTATTGGACGGACACAGCAGCAATTCCTTGCCCGTATTGGGGCTATAGAAATGGAAGAAAAGACAATACCTAATTCTGAATGCTCAAATGATCTGCGGATTACACTTTTACCTTGGGTGGATGGTGTTGCTCGTTTGGTACTGATACTAGAACTACAAGATAAGTCTGCGATAGTAAGGGCTGCTGAGTCAATTGCTGGTGCATCTATCAATGAACATATGCGTATTGCATTCAAGGAGGCTGGAGCAGTTAAGCATTTAGTGCGGCTTTTGAATTGTGATGATAATGCGGTACAGTGGGCCGTAATACAAGCTTTGGAAAAGCTGTCTCCTAGCAATGTAGTTTGCCATGCAATTGAAGGTGAAGGTGTTTTAGGTCCTTTAGTTAGTATTTTGAAATGCTCAGAGCCAGATGGAACTATTGTGGAACAGTCTTTGAACATACTTGCTCGGATATTAGACCCCAGTAAAGAGATGCAATTGAAGTTTTATGATGGACCAGTTAAGGGATCTGAGAAAACATTGGATGGAGCCAAAAATGGTGATGATTCAACAGGGTTAAGTGGCACTGAACAAGCTACATCAAAATCAAATACCAGGAACATTATGTTGGATTCTGTTTTCATTGAACACCTTCTTCAGATTCTGAAGTCCTCTTCACCGAGGGTACAAGAAAAAGCTGCATCTGTGCTCGAGTATGTGGCACTGATTGACCCAACTCTGGCCCCTATTATATCTGTGGATATTGAATCTGGTCTCAATTCTGTTTTTCAGCAAAAAGTTTTGAAAATTTCAGCTGACATGGAATCTGATGTAGAAGATCAGTTCTCTGAAGCATATATAGTCGAATTTCAAGAAGCCGGTCTTGCAATATCTGCAGCATCCCGGTTAATGACAAGACTACTCGATTCTGAGCAGTTTAGCCTCAAAATAGATTCATCCTATTTCATTGATTTGCTTCTTGGAATTCTCAGGTCAAGTATTCCCCTCCACAACAAAGATTGGGTAGCTGCTTGCCTAGTTAAGCTAAGTTCCGTCTCTGGTCACAACACGAAATATAATCCAATTGACGTTGAAGTTACAATTCACGAGACAATACCAAGACTTATAGAACAGATCAAAACTTCATTCTCTCTAGAAGCACAGGAAGATGCTGCTGTAGAACTTAACAGAATAATATCTGAAGGAGTGGTGGATTCTACAGGAGCTATTATTTCTGAGGGTGCAATATATCCATTGGTGAAGCTGATTCAAGAAGGGAGTGAAAAGGGTGTTGAAGCAAGCTTAGCAATACTTTATAATCTGAGTATGGACAGTGAGAACCATTCAGCACTTGTGGCTGCTGGAATTGTCCCTGCCTTAAAAAGAATAGTTCTAGCAAACAGACCACAGTGGGAAAGGGCACTTCATTTGCTTAGGACTCTGCAAATTTGA 2553 0.4031 MLASTIPLTPSTSNLNLSHFFTTHAPPEFLQRNPKSRVTLFSKSNSKLVVVARVNSNGRDGAIDATSQQQQQQESSPPPGIDTVNSTSSGLGDGYVALFVRMLGLDHDPLDREQAVDTLWKYSLGGKKCIDTLMQFPGCINLIVNLLRSESNSACEAAAGLLRSLSSVNIYRNHVADSGAIEEINRLLRQPSLASEVKEQSLSTLWNLSFDEKLCTKIANSDILLLTIKYLDDEDIKVKEAAGGILANLALSRVNHNIMVEAGVIPKLAKFLTSNSEGSKVIKKEAKNALLELVKDEYYRILVIEEGLVPVPLVGAAAYKSFTPSLHLWPTLPDGSEIERTSRKPSRFGASELLLGLNINDKNANIEEAKANAIIGRTQQQFLARIGAIEMEEKTIPNSECSNDLRITLLPWVDGVARLVLILELQDKSAIVRAAESIAGASINEHMRIAFKEAGAVKHLVRLLNCDDNAVQWAVIQALEKLSPSNVVCHAIEGEGVLGPLVSILKCSEPDGTIVEQSLNILARILDPSKEMQLKFYDGPVKGSEKTLDGAKNGDDSTGLSGTEQATSKSNTRNIMLDSVFIEHLLQILKSSSPRVQEKAASVLEYVALIDPTLAPIISVDIESGLNSVFQQKVLKISADMESDVEDQFSEAYIVEFQEAGLAISAASRLMTRLLDSEQFSLKIDSSYFIDLLLGILRSSIPLHNKDWVAACLVKLSSVSGHNTKYNPIDVEVTIHETIPRLIEQIKTSFSLEAQEDAAVELNRIISEGVVDSTGAIISEGAIYPLVKLIQEGSEKGVEASLAILYNLSMDSENHSALVAAGIVPALKRIVLANRPQWERALHLLRTLQI* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1027 850 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 138 180 IPR000225 GO:0005515
Lan11g1027 850 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 31 849 - -
Lan11g1027 850 MobiDBLite consensus disorder prediction 543 568 - -
Lan11g1027 850 Gene3D - 63 321 IPR011989 -
Lan11g1027 850 SMART arm_5 770 810 IPR000225 GO:0005515
Lan11g1027 850 SMART arm_5 211 251 IPR000225 GO:0005515
Lan11g1027 850 SMART arm_5 569 609 IPR000225 GO:0005515
Lan11g1027 850 SMART arm_5 126 167 IPR000225 GO:0005515
Lan11g1027 850 SMART arm_5 485 527 IPR000225 GO:0005515
Lan11g1027 850 SMART arm_5 168 210 IPR000225 GO:0005515
Lan11g1027 850 SMART arm_5 444 484 IPR000225 GO:0005515
Lan11g1027 850 SMART arm_5 252 295 IPR000225 GO:0005515
Lan11g1027 850 Gene3D - 402 626 IPR011989 -
Lan11g1027 850 MobiDBLite consensus disorder prediction 60 86 - -
Lan11g1027 850 Gene3D - 659 849 IPR011989 -
Lan11g1027 850 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 781 823 IPR000225 GO:0005515
Lan11g1027 850 MobiDBLite consensus disorder prediction 554 568 - -
Lan11g1027 850 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 179 212 IPR000225 GO:0005515
Lan11g1027 850 SUPERFAMILY ARM repeat 69 809 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1027 751 831 U-box Gene Family AT2G28830 40.244 1.67e-07 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1027 11 11838436 11845546 Lan11g1027 11 11838436 11845546 ECH