Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0988 ATGTTCCCTTTAGTTCTCTTCCTTTTTCTTCTATACAACTCTCTTGTTGCACCTGTGAACCCTCTAAGCACCGAAGGCTATGTGCTTTTAACACTGAAGAATTCTATCACCAACGACCCAGAAGGTTCTATGAGTAACTGGAACTCTTCTGATGAAACTCCATGTTCATGGAATGGAATCACATGCAAGGACCAAAGTGTTGTTTCCATTAGTATTCCAAAGAAGAAACTTTATGGGTTTCTACCTTCTGCTATAGGATATCTTTCTCAGCTTCGTCATGTAAATTTCAGAAACAACAACCTCTTTGGGAATTTACCTAAAAAGCTTTTTGAAGTTCAGGGATTGCAAAGTTTGGTGCTTTATGGTAATTCCTTATCTGGGTCTGTTCCAAATGAGATTGGGAAGCTCAGGTACCTTCAAACTCTAGATTTATCACAAAATTTATTCAATGGGTCTTTACCTGCTACAATTGTTCAATGCAAGAGGCTCAAAGCACTTGTTCTGAGTCATAATAATTTCAGTGGTACTTTGCCAGATGATGGATTTGGTAGTAATTTGCTTTCTTTGGAAAAACTTGATCTTTCTTTCAATCAGTTCAATGGTTCAATTCCTAGTGATATTGGAAATTTGTCAAGTTTGCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCAATCCCACCAAGTCTTGGTAATTTGCCTGAGAAGGTTTACATTGATTTATCTTACAATAATTTAAGTGGACCAATACCCTTAACTGGTGCTTTAATGAATAGAGGACCAACTGCTTTTATTGGAAATTCTGGTCTATGTGGCCCTCCTTTGAAGAATCCATGTGCATTGGATAATCCTGGTTCTGCTACTGCACCTTCATCTTTTCCATTTTTGCCTGATAATTACCCATCTCAAGGTAATGGTTCTGGGAAAAGTGAGAAAAACAAAGGGCTAAGTAAGGGAGTTATGATTGGCATTGTTGTAGGTGATGTAATTGGGATTTGCATTTTTGGTTTGTTGTTCTCTTACTTCTATTCAAGGGTTTGTGGTTTTAACCAGGATCCGAATGAGGATGGTAGTGACAAGGAAGGGGAAGTTATGAGGAAAGAGTTCTTGTGTTTCGGAAAGGGTGAGTCTGAGACCCTATCTGATTATGTTGAGCAATATGATCTTGTCCCATTGGATACTCAAGTGGCTTTTGATTTGGATGAGCTTCTTAAGGCTTCGGCTTTTGTTCTCGGAAAGAGTGGAATAGGGATTGTCTACAAAGTTGTGCTTGAAGACGGGCTTACGTTGGCTGTGAGAAGATTGGGGGAGGGAGGTTGTCAAAGGTTTAAAGATTTCCAAACTGAAATTGAAGCAATTGGAAAGTTAAGGCATCCTAATGTTGTTACTTTGAGAGCTTATTACTGGTCTGTTGATGAAAAGCTTCTCATCTATGATTACATTCCCAATGGAATCCTGAATACAGCAATTCACGGGAAGGCTGGACATGTCACATTCACGCCATTATCTTGGTCTGAGCGAATGAAAATCATGAAAGGAATTGCAAAAGGATTGGTCTACTTGCATGAGTTTAGCCCCAAAAAATATGTCCATGGAGACCTGAAGCCAAGTAACATACTACTAGGCCATAACATGGAACCTCACATTTCTGATTTCGGTCTTGGACGGCTTGCAAATATTGCCAGTGGAGGCTCTCCAACCTTGCAATCGAACCGTATGGCCGCAGAGAAGCAACAAGAAGGACAAAAGAGCTTATCCACAAAAGCCACAGCTAATATTTTGGGCAATGGTTATCACGCTCCAGAGACACTGAAAGCGGTGAAGCCATCACAGAAGTGGGATGTGTATTCATATGGTGTGATCTTGCTAGAAATGATTACAGGACGATTGCCGATTGTCCAAGTTGGTAATTCAGAAATGGACCTTGTTCATTGGATTCAATTCTGCATAGATGATAAGACGCCTCTCTCAGATGTTTTAGACCCGTATTTAGAATACGATTCGGATAAGGAAGAGGACATTATTGCAGTTTTGAAGATTGCAATTGCTTGTGTAAATAGCAGCCCAGAAAAGCGACCGATAATGAGGCATGTGCTTGATATTTTGGATAGATTGTCCATATCCACTGACTAA 2139 0.3974 MFPLVLFLFLLYNSLVAPVNPLSTEGYVLLTLKNSITNDPEGSMSNWNSSDETPCSWNGITCKDQSVVSISIPKKKLYGFLPSAIGYLSQLRHVNFRNNNLFGNLPKKLFEVQGLQSLVLYGNSLSGSVPNEIGKLRYLQTLDLSQNLFNGSLPATIVQCKRLKALVLSHNNFSGTLPDDGFGSNLLSLEKLDLSFNQFNGSIPSDIGNLSSLQGTVDLSHNHFSGSIPPSLGNLPEKVYIDLSYNNLSGPIPLTGALMNRGPTAFIGNSGLCGPPLKNPCALDNPGSATAPSSFPFLPDNYPSQGNGSGKSEKNKGLSKGVMIGIVVGDVIGICIFGLLFSYFYSRVCGFNQDPNEDGSDKEGEVMRKEFLCFGKGESETLSDYVEQYDLVPLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGCQRFKDFQTEIEAIGKLRHPNVVTLRAYYWSVDEKLLIYDYIPNGILNTAIHGKAGHVTFTPLSWSERMKIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHISDFGLGRLANIASGGSPTLQSNRMAAEKQQEGQKSLSTKATANILGNGYHAPETLKAVKPSQKWDVYSYGVILLEMITGRLPIVQVGNSEMDLVHWIQFCIDDKTPLSDVLDPYLEYDSDKEEDIIAVLKIAIACVNSSPEKRPIMRHVLDILDRLSISTD* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0988 712 SUPERFAMILY L domain-like 25 278 - -
Lan11g0988 712 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 711 - -
Lan11g0988 712 Gene3D Phosphorylase Kinase; domain 1 381 482 - -
Lan11g0988 712 Pfam Leucine rich repeat 90 148 IPR001611 GO:0005515
Lan11g0988 712 CDD STKc_IRAK 413 707 - -
Lan11g0988 712 MobiDBLite consensus disorder prediction 294 314 - -
Lan11g0988 712 SUPERFAMILY Protein kinase-like (PK-like) 412 704 IPR011009 -
Lan11g0988 712 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Lan11g0988 712 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Lan11g0988 712 SMART LRR_typ_2 186 210 IPR003591 -
Lan11g0988 712 SMART LRR_typ_2 88 112 IPR003591 -
Lan11g0988 712 SMART LRR_typ_2 136 160 IPR003591 -
Lan11g0988 712 ProSiteProfiles Protein kinase domain profile. 407 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0988 712 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515
Lan11g0988 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Lan11g0988 712 Pfam Protein kinase domain 413 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0988 712 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 711 - -
Lan11g0988 712 SMART serkin_6 412 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0988 712 Gene3D Transferase(Phosphotransferase) domain 1 483 711 - -
Lan11g0988 712 Gene3D Ribonuclease Inhibitor 182 283 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0988 Lan-Chr11 10769374 10771967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0988 4 712 Receptor kinase-like Gene Family AT2G01210 67.038 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan11g0988 Pkinase 2.8e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0988 11 10769374 10771967 Lan11g0988 11 10769374 10771967 ECH