Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0979 ATGAACCAAATAACCCTCTTTATCCCCTTCTTCTTTCTCATAGTTAGAATCTCTTTCTGTTATGTGGATCCAAAGTTCTTAGCTTGCAAGCCCATGACATGTGGTAATAACCAAAACATAAGCTACCCATTCTACATCAAAGATAAACAAGAAGCGTTTTGTGGGAACCCAGGTTTTGAACTCAGTTGTAACAACAAAGGTTTCCCAATCCTTAATCTTATAGATGCTACCTACATAGTCCAGGAAATATTCTACAACAACCACACACTAAGATTGTCCAACGCTGTGTTCGCTGAGTCAACCACTTCTGATCACTGTATTGTTCAAATAAAGAAACTCTCGGTTGGAAAATACAGGTTCTATGTTGCTCCAAACCAAAGTGACGTATTGTTGTTCTACGGCTGCGACTTAACATCGCTATCGGAAGATCTGAGAGCGAACAAAATTGGGTGTTCACAAGAAAATAAAACGAGTTCTGTTGTGGCGTCATATAGGGAAGATAAGAGTCTGAGAGAAGCGTGCAAGGGTGGTGTGGTGAATGTAACAGTGGAAGATGTTGAAGGAGGGATTAAAGAAGCATTGAGAAAAGGGTTTGTGTTGAATTGGAATGCTAGTAATTGTAGTACTTGTACAAGGAGTGGAGGGAGATGTGGGTTTGATTTAAATGCTGATACTTATGCTTTTAGGTGCTATTGTCGTGATAGACCTCATGCTGTTGATTGTGATCCAGATGCAGAGGCAGAGAAGTTGAGTAAGGCAGAGAAACTTGTCATTGGTTTAAGTGTTGGACTCGTAAGCATCTTGATAGTTTTATTGCTCCTACTCTACAAAAGAAAATATGGTTCGTCAGGTATTCAATTCGAAACAACAAATTCTTATTCTGATCCTTCCTCAACTCCAGATGCAGAAAATGGCAATGTGTACTTTGGAGTTCCCCTCTTCTCCTACAAGGAGCTTGAAGAAGCGACAAGCCGTTTCGACCAAAATAAACAAATCGGAGATGGGGGCTTTGGAACTGTCTACTATGGGAAACTCCAAGATGGACGCGAAGTTGCTGTGAAGCGCTTATACCAACACAACTACAGGCGAGTAGAACAGTTCATGAATGAAGTTCAGATCCTCACACGTTTGCGCCACAAAAATCTTGTGTCCCTCTATGGCTGCACTTCAAGGCAGAGCCGCGAACTACTGCTAGTGTATGAATACATTTCAAATGGAACCGTTGCATCTCATCTCCACGGTGAATTAGCAAAACCTGGCTTACTACCATGGTCTATAAGAATTAAAATTGCCATAGAGACGGCCAGTGCGTTGGCTTATCTTCATGCCTCTGAGATCATTCACCGCGATGTGAAAACCAACAACGTTCTCCTTGACAGCAGTTATTGTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTATTCCCGAACGATGTCACACATGTTTCCACAGCACCGCAAGGGACTCCAGGTTACGTTGATCCGGAATATTACCAATGCTACAAGCTTACTAGCAAGAGTGATGTATATAGCTTTGGAGTGATGCTCATTGAGCTAATATCATCTCAACCAGCTGTTGATATGGACAGGCATAAGGGTGAAATAAACTTGTCAAGTTTAGCTATAAAGAAGATTCAAGAGAGTAAATTTAGCGAGCTCGTTGATCCTTATCTTGGTTTTGATTCGGACAGTGAGGTTAAGAGGATGATAATCTCAGTCGCGGAATTGGCTTTTCAATGTTTACAACGCGACAAGGAATTAAGACCTTCCATGAATGAAGTCTTGGATGTGCTAAAGAGAATTGAAAGTGAGAAGAATGAGCCAGAAGTGCATCAAGAGGAAGCAGATGTTTACAGTGCAGGTGCTTCAGACTCGGAATGGGATCAAGTTGTGAAGCAACCTTCTTCACCAATAACAGTTACAGATAACTGGGAAAGTCAAACTACCACTCCTAATGTATTGCAAGAATCTGTGATGCAAACATGTGAAGATGTTATTTGA 2001 0.4128 MNQITLFIPFFFLIVRISFCYVDPKFLACKPMTCGNNQNISYPFYIKDKQEAFCGNPGFELSCNNKGFPILNLIDATYIVQEIFYNNHTLRLSNAVFAESTTSDHCIVQIKKLSVGKYRFYVAPNQSDVLLFYGCDLTSLSEDLRANKIGCSQENKTSSVVASYREDKSLREACKGGVVNVTVEDVEGGIKEALRKGFVLNWNASNCSTCTRSGGRCGFDLNADTYAFRCYCRDRPHAVDCDPDAEAEKLSKAEKLVIGLSVGLVSILIVLLLLLYKRKYGSSGIQFETTNSYSDPSSTPDAENGNVYFGVPLFSYKELEEATSRFDQNKQIGDGGFGTVYYGKLQDGREVAVKRLYQHNYRRVEQFMNEVQILTRLRHKNLVSLYGCTSRQSRELLLVYEYISNGTVASHLHGELAKPGLLPWSIRIKIAIETASALAYLHASEIIHRDVKTNNVLLDSSYCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYKLTSKSDVYSFGVMLIELISSQPAVDMDRHKGEINLSSLAIKKIQESKFSELVDPYLGFDSDSEVKRMIISVAELAFQCLQRDKELRPSMNEVLDVLKRIESEKNEPEVHQEEADVYSAGASDSEWDQVVKQPSSPITVTDNWESQTTTPNVLQESVMQTCEDVI* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0979 666 Gene3D Transferase(Phosphotransferase) domain 1 403 626 - -
Lan11g0979 666 CDD STKc_IRAK 332 601 - -
Lan11g0979 666 SMART serkin_6 326 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0979 666 SUPERFAMILY Protein kinase-like (PK-like) 304 598 IPR011009 -
Lan11g0979 666 Pfam Protein kinase domain 327 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0979 666 Gene3D Phosphorylase Kinase; domain 1 298 402 - -
Lan11g0979 666 ProSiteProfiles Protein kinase domain profile. 326 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0979 666 Pfam Wall-associated receptor kinase galacturonan-binding 29 93 IPR025287 GO:0030247
Lan11g0979 666 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 646 IPR044652 -
Lan11g0979 666 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Lan11g0979 666 Pfam Wall-associated receptor kinase C-terminal 158 234 IPR032872 -
Lan11g0979 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Lan11g0979 666 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0979 Lan-Chr11 10573727 10586872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0979 206 653 Receptor kinase-like Gene Family AT1G25390 54.881 2.44e-165 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan11g0979 Pkinase 4.2e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0979 11 10573727 10586872 Lan11g0979 11 10573727 10586872 ECH