Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0802 ATGGCGTCGCAACTAGCGATCCTCTCTCGCACCCTCCTCCGCCACAAATCCCACTCCATCAGAACCATCACCTCCTTCCCCTTCCTCTCCCAAGAGCCCCAACTCGCCGACCCCATTTCACCACCCTCAACCACCACCACCACCACCACCACCACCTCCCTCCCTCCAAACCCCGCCTCCGGTTCCCCTCTCTACAACGAGAACTGGCGCAACCCCATTCCCGCCACTTCCCTATCCCCTTCCTCCATCATCCCCGCTGGATTCTTCAACGACCCTTCATTCAGCGCTTCCAATTCCTTCTCCGATGCCACCTACGACTCGCAGACGCTACTCAATCTCTTCGCCGATTGGACTGCGTCGCAGAAGTGGCATGATGTGAAGAATCTCTTTGAGGCGTGGGTTAAGTCGCTGGATAGGAATGGGAAACCTAATAAACCTGATGTTGATCTTTATAACAATTATTTGAGGGCTAGTTTGATGATCGGAGCTTCTGCGGCCGAGTTGCTTGACCTCGTCGCGCAGATGGATGAGTTTGGGATTAAACCTAACACGGTGTCGTTTAATTTGGTGCTTAAGGCTATGCACCAGGCTAATGAGACTCTTGCTGCTGAGAAATTGCTCGAACGGATGCTGCAGACTGGAAATGAATCTCTCCCTGATGATGAATCATATGACCTGATCATTAGAATGCACTTTTTGACAGACCAGATTGATGCTGCATTCAAATATATAGATTTAACTTTGAAATCTGATTACAAGTTGTCAACGAAGGTATTTATGGACTGTGTGAGGAGTTGTGTCAATAAGGGCAGGCTTGATACATTGGTGACAATAATTGAAAGGTGCAAGACAACAGATCAGAACAAAGCTCTTTGCCCTTCCTGGAACATGTGCCAATTTATAACTGAAGAGGCACTTCGAAAGGATAATAGCAAGTTAGCTTTTTATGGACTGGAGTTTATGGCTAGGTGGATGGTAAAGGGTGAACGTGAAAGGCCCGTTGTTCTGCTTTCTGTAGATGAAGGTTTAGTTGTGTCAGCTCTTGTGACTGCAGGTAGAACCTATAATTCTGAGTTGCTAGGGGCAGCATGGGCTGTTTTGGACCGCTCATTGCGTAAAAGAAAAGCTCCTAATCCAGAATCATATCTTGCAAAGATATATGCCCATGCATCATTGGGGAATCTACAAAAGGCTTTTGGCACTCTACATGAGTATGAGTCTGCTTATGGAGATTCCTCCGAAGAAGCTGAAGACTTGTTCAGCCCATTTACTTCTTTACATCCATTGGTTGTGGCATGCTCCAAGAAGGGTTTTGAGACCTTGGACACTGTTTATTTTCAACTGGAGAATTTAAGCCAGGCAGAGCGTCCTTATAAATCAGTTGCTGCACTGAACTGCATCATTGTAGGGTGTGCAAATGTATGTGACCTTGATCGTGCATACCAAACTTTTGAATCAATTGGGTCTGCCTTTGGGTTGACCCCTGATATTCATTCATACAATGGGCTGATGCATGCCTTTGGGAAGCTCAAGAAGACACATGAAGCTACAAGGGTGTTTGAGCACCTAGCGAGTTTGAATGTTAAGCCTAATGCAAAGTCATATTCGCTGCTTGTTGATGCCCATCTGATCAATCGGGATGTCAGATCTGCTCTTGCAGTGATTGACGATATGATAGCAGCTGGTTTTGAACCGACAAAGGAGACATTAAGAAAGGTCAGAAGACGGTGTCTGCGAGAGATAGACTATGAAAGTGATGAGCGCGTGCAATCACTGGCCAGATCTCTCAATATCCGAGTAGGTGGAGAAGCCCGCCGGGACATCCTGTTCAATCTTGATTACAGTATGGATTATGCTTGA 1860 0.4651 MASQLAILSRTLLRHKSHSIRTITSFPFLSQEPQLADPISPPSTTTTTTTTTSLPPNPASGSPLYNENWRNPIPATSLSPSSIIPAGFFNDPSFSASNSFSDATYDSQTLLNLFADWTASQKWHDVKNLFEAWVKSLDRNGKPNKPDVDLYNNYLRASLMIGASAAELLDLVAQMDEFGIKPNTVSFNLVLKAMHQANETLAAEKLLERMLQTGNESLPDDESYDLIIRMHFLTDQIDAAFKYIDLTLKSDYKLSTKVFMDCVRSCVNKGRLDTLVTIIERCKTTDQNKALCPSWNMCQFITEEALRKDNSKLAFYGLEFMARWMVKGERERPVVLLSVDEGLVVSALVTAGRTYNSELLGAAWAVLDRSLRKRKAPNPESYLAKIYAHASLGNLQKAFGTLHEYESAYGDSSEEAEDLFSPFTSLHPLVVACSKKGFETLDTVYFQLENLSQAERPYKSVAALNCIIVGCANVCDLDRAYQTFESIGSAFGLTPDIHSYNGLMHAFGKLKKTHEATRVFEHLASLNVKPNAKSYSLLVDAHLINRDVRSALAVIDDMIAAGFEPTKETLRKVRRRCLREIDYESDERVQSLARSLNIRVGGEARRDILFNLDYSMDYA* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0802 619 MobiDBLite consensus disorder prediction 32 65 - -
Lan11g0802 619 Pfam Pentatricopeptide repeat domain 145 194 IPR002885 -
Lan11g0802 619 Pfam PPR repeat family 495 541 IPR002885 -
Lan11g0802 619 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 531 565 IPR002885 -
Lan11g0802 619 PANTHER OS07G0599000 PROTEIN 1 619 IPR044605 -
Lan11g0802 619 Gene3D Tetratricopeptide repeat domain 440 594 IPR011990 GO:0005515
Lan11g0802 619 TIGRFAM PPR: pentatricopeptide repeat domain 534 566 IPR002885 -
Lan11g0802 619 TIGRFAM PPR: pentatricopeptide repeat domain 498 532 IPR002885 -
Lan11g0802 619 Gene3D Tetratricopeptide repeat domain 113 319 IPR011990 GO:0005515
Lan11g0802 619 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 496 530 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0802 11 7568009 7573902 Lan11g0802 11 7568009 7573902 ECH