Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0791 ATGGATAAGGGTAAGTACCCTAGAGATCTGCTTCAAATATTTAACATGTCAAGTACCACTAGTCGTGGTGTTGGTGTTAGTGATGATCATAATCATAATCATCAACAACATCAGCATCAGAATTTTTATCACCAACAACTTCTAGAAGAAGAGAATGGTGAAGAGGATAAGGAAGAGGTTGAGTTGAACCTTGGTCTCTCATTAGGTGGAAAATTTGGTGTTGACAAGTATGCTGCATATAAGAGCAACAAGCTCATGAGGTCCTCTTCTGTTGTGGGGACAATGCCCCTATTTCGTGAGGGAGAGGGCGCGGTGTCGCGATCACTGATGATGGCGACGCCACACCCCCTCCTCATGAGGACATCCTCTCTGCCGGTAGAGACAGAAGAGGAGTTGAGAAAGAGGAAGGAGCTGCAGACGCTGCGGCGGATGGAGGCCAAGAGGAGGAGGTCCGAGAAGAGAATTTCCAAGCCGGAGAGAGAAGGTTCTGCTGGCGCGGGTGGTGGTGGTGGTTTGGAGGAAGTAGAGGGTTCAAGTGCAGCAGTAGCAACAACAGTGGGGTTGAATAGGTTTGGTGGTTCTGGAAATGTGGGGCCACCACCTTGGGGGATGGTGGCAAAACAAGTTGTTCTTGGTGATGTGTTGGGAAAAGGAAAAATTGGTGGTGCTGGTTTTCAAGGATTGTTTGCACAGCCATCTTCTCAGGGTTCTGTTGATTCCCAAGGTGGAAGCTCATCTTCAGTGTCTGAAATGGAGAGTAGGCCCTTTCTAGGACCAAGCAGTTGTGGAGAAACAAGAAGCCCTGCTAGTAATCAGTCATTACAGGAACGGCGAAGCGGTCATGATGCTGTTGGCTCATCAAGCACAAAGACAAATGAAAATATCACCAAAACTTCCGGAGTTGCTGAGATGGAGAATCCATCTAAAAGACCACTCCCTCCTGCCCAAAATACCGGGAGAGAAATTGGGACAAACTCAATGGAAGACATGCCTTGTGTATTTACAAAAGGGAATGGACCTAATGGAAGAAGAGTTGAGGGAATCTTATATAAATATGGTAAAGGGGAAGAAGTGACAATAATGTGTGTATGTCATGGAAAATTTCTGTCTCCGTCAGAGTTCGTTAAGCATGCAGGTGGTGGTGATGTAGCTAACCCACATAGGCACATTGTTATTAACCCTTCTGCTGCTCCCTTTGTTTAG 1203 0.4655 MDKGKYPRDLLQIFNMSSTTSRGVGVSDDHNHNHQQHQHQNFYHQQLLEEENGEEDKEEVELNLGLSLGGKFGVDKYAAYKSNKLMRSSSVVGTMPLFREGEGAVSRSLMMATPHPLLMRTSSLPVETEEELRKRKELQTLRRMEAKRRRSEKRISKPEREGSAGAGGGGGLEEVEGSSAAVATTVGLNRFGGSGNVGPPPWGMVAKQVVLGDVLGKGKIGGAGFQGLFAQPSSQGSVDSQGGSSSSVSEMESRPFLGPSSCGETRSPASNQSLQERRSGHDAVGSSSTKTNENITKTSGVAEMENPSKRPLPPAQNTGREIGTNSMEDMPCVFTKGNGPNGRRVEGILYKYGKGEEVTIMCVCHGKFLSPSEFVKHAGGGDVANPHRHIVINPSAAPFV* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0791 400 PANTHER AFP HOMOLOG 2 5 397 IPR031307 GO:0007165
Lan11g0791 400 Coils Coil 134 154 - -
Lan11g0791 400 Pfam Tify domain binding domain 357 392 IPR032308 -
Lan11g0791 400 MobiDBLite consensus disorder prediction 263 303 - -
Lan11g0791 400 Pfam Ethylene-responsive binding factor-associated repression 55 93 IPR012463 -
Lan11g0791 400 PANTHER NINJA-FAMILY PROTEIN AFP1 5 397 - -
Lan11g0791 400 MobiDBLite consensus disorder prediction 232 327 - -
Lan11g0791 400 MobiDBLite consensus disorder prediction 126 160 - -
Lan11g0791 400 MobiDBLite consensus disorder prediction 122 178 - -
Lan11g0791 400 Pfam Putative nuclear localisation signal 118 253 IPR032310 -
Lan11g0791 400 MobiDBLite consensus disorder prediction 232 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0791 Lan-Chr11 7485524 7488683 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0791 11 7485524 7488683 Lan11g0791 11 7485524 7488683 ECH
Lan11g0791 11 7485524 7488683 Lan2g0798 2 17464655 17469777 LSH