Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0691 ATGAGACAAGAAGGGAACCCATTTGATCTTAACAATATGCCTGATGAGTACTCTAGAGACACTAAACAACTTCTCCAAGCTAGCTCCTCATCCGGGTGCAGCAGGAAAAAGAAAAGCGGCGTGAAAGATGGAAAAGACGATTGTGGAAAAGTCTACGAGTGTAGATTTTGTTCCCTCAAGTTCTGTAAATCTCAAGCACTTGGGGGACACATGAACCGCCACCGCCAAGAAAGGGAAACAGAGACACTGAACCATGCTCGTCAGCTGGTCTTTCGTAACGATCATAACCTAACTACTCAAGTTGCCCCTCGCCTAGGATGCTGTCAAACAGTTCCAACAGGAAGCTATCTTCCAACAAGTAACATGGGAGACCCAATAAAGCCTCTGAAATTACCAAAACACTTCTCTACTTCATCCTCAATCAACATTTCACCATCACCACCACCTCCACAACCATTCCACTCACACTACTCTCACCATTATTCTGTGAATGATTGCTATGTGGGACATGTCATGAGTAGCAGTAGCAGCCAGAAATATGGACACAACCTAGACTCTAGCTACACGTGCATTGGTGCACCAGTTGGACAAGCATTCCCAGGTGGTGGTAAGGACATGTCACTGCTAAATCAGGAGGAAAGGATGAATTGGGTAAGGAGCTATTCAGGGACAAAGAAATGTTTCAATCCTAATTCAGTGACCAATCGGTTTCACGATCATGGGTTCTAA 729 0.4486 MRQEGNPFDLNNMPDEYSRDTKQLLQASSSSGCSRKKKSGVKDGKDDCGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRNDHNLTTQVAPRLGCCQTVPTGSYLPTSNMGDPIKPLKLPKHFSTSSSINISPSPPPPQPFHSHYSHHYSVNDCYVGHVMSSSSSQKYGHNLDSSYTCIGAPVGQAFPGGGKDMSLLNQEERMNWVRSYSGTKKCFNPNSVTNRFHDHGF* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0691 242 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
Lan11g0691 242 MobiDBLite consensus disorder prediction 17 35 - -
Lan11g0691 242 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Lan11g0691 242 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Lan11g0691 242 PANTHER ZINC FINGER PROTEIN JAGGED 1 202 IPR045320 GO:0003700
Lan11g0691 242 PANTHER ZINC FINGER PROTEIN JAGGED 1 202 IPR031113 GO:0007275
Lan11g0691 242 Gene3D Classic Zinc Finger 26 103 - -
Lan11g0691 242 MobiDBLite consensus disorder prediction 1 45 - -
Lan11g0691 242 SUPERFAMILY beta-beta-alpha zinc fingers 50 80 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0691 Lan-Chr11 5862180 5864361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0691 4 196 C2H2 Transcription Factor Family AT1G13400 41.584 1.13e-30 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0691 11 5862180 5864361 Lan11g0691 11 5862180 5864361 ECH