Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0682 ATGAGTAGCAATGGCCAAAGTTCTGGTGCTAATCACTACATCATGGGTTTAATATGTAACGCTGGTGCTGGTGCTGCAGCTGGAGCCATAGCGGCTACATTTGTGTGCCCATTGGATGTGATCAAGACAAGGTTACAAGTTCATGGCCTTCCTCCTGCACAGAAAGGTAGCATCATCATCACGAGCTTACAGAATATATTTAAGACTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTGGCATTACTTCCAAATTGGGCAGTTTACTTCACAGTTTATGAGCAACTAAAGGGTTTGCTTCGTTCACATGCAGATGGTTCCAATGAACTAACAACAGTTGGAAATATTATATCCGCTGCTGGTGCTGGTGCAGCAACAGCGATTTCGACAAATCCATTGTGGGTTGTTAAGACAAGACTCCAAACTCAAGGAATGAGGCCTGATGTTATACCTTACAAAAGCATTCTTTCTGCTTTGACAAGGATTACACATGAGGAAGGCATGCGAGGGCTTTACAGTGGCATTGTACCTTCATTGGCTGGAATAAGTCATGTTGCAATCCAATTTCCAGCATATGAAAAGATCAAGTCTTACATAGCTAAAAAAGACAACACAACTGTTGACAAGCTGAGTCCTGGGAATGTTGCCGTTGCATCATCTATCTCAAAAGTAGTAGCATCTGTAATGACTTATCCACACGAGGTGATACGTTCCAGGCTGCAAGAGCAAGGCCACGCCAAAAGTAATGGCGCCCGGTATGCAGGGGTTATTGATTGTACTCGGAAGGTGTTCCAAAAGGAAGGCGTTCCAGGCTTTTATCGTGGTTGCGCAACCAATCTATTAAGAACAACTCCATCTGCTGTTATTACGTTCACTAGTTATGAGATGATACACAGGTTTTTGCAGCGGGTTATACCTCAGGACAAGAAGGGGTATGCAGAAGGTTCTCGACAATGA 969 0.4396 MSSNGQSSGANHYIMGLICNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPAQKGSIIITSLQNIFKTEGFRGMYRGLSPTILALLPNWAVYFTVYEQLKGLLRSHADGSNELTTVGNIISAAGAGAATAISTNPLWVVKTRLQTQGMRPDVIPYKSILSALTRITHEEGMRGLYSGIVPSLAGISHVAIQFPAYEKIKSYIAKKDNTTVDKLSPGNVAVASSISKVVASVMTYPHEVIRSRLQEQGHAKSNGARYAGVIDCTRKVFQKEGVPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLQRVIPQDKKGYAEGSRQ* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0682 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 202 IPR018108 -
Lan11g0682 322 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 13 314 IPR044712 GO:0006862|GO:0055085
Lan11g0682 322 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 13 314 - -
Lan11g0682 322 Pfam Mitochondrial carrier protein 214 306 IPR018108 -
Lan11g0682 322 Pfam Mitochondrial carrier protein 20 106 IPR018108 -
Lan11g0682 322 Pfam Mitochondrial carrier protein 114 206 IPR018108 -
Lan11g0682 322 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Lan11g0682 322 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Lan11g0682 322 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Lan11g0682 322 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Lan11g0682 322 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
Lan11g0682 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 304 IPR018108 -
Lan11g0682 322 SUPERFAMILY Mitochondrial carrier 18 300 IPR023395 -
Lan11g0682 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Lan11g0682 322 Gene3D Mitochondrial carrier domain 16 308 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0682 Lan-Chr11 5734913 5743225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0682 33 322 Chloroplast and Mitochondria Gene Families AT1G25380 69.048 8.54e-146 413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0682 11 5734913 5743225 Lan11g0682 11 5734913 5743225 ECH
Lan11g0682 11 5734913 5743225 Lan9g0967 9 16229776 16234526 LSH