Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0622 ATGAAAGCTTCAAGTTTTCAAAAGATGGCGAAAACAACACCATCTAAAGCTTTTATTATCAGATTCAATTTGGTGTGTCTTGCCATCTTCCTTAGTGTTTATGCAACCCTTCTTCTCCGTCCATCTTCGCCAGTGTATTTCAACAATGCAGCCTCCCTTGTTAGGTGCTCCTTGCGTGAATGTCATAACAAGGTAGAAAAGAGCATTAAAATGAAAGCAGTATTGGAAGAACCTCGAGTAAAACCTGAAAGCCCAAAGAAGCACCAGACAAAGATAGAGATGCCTAGTTTCTTTAGTAAAATAGGGAAAGGATTGAAGATTGGAATGGTGAATATGGATGAATATGATGTGAGTGAATGGAGCACAAAAGGAGAAGCAACACCTATATACTTTGAAAGCGTATCACATTTTTTCAACTGGACAGATTTATTTCCTGAATGGATAGATGAGGAAGAAGAGAATGATGTTGCATCATGTCCTGAGATACCTATGCCAGAGTTTGCACAATATGAAAGCATGGATGTAATAGTAGCCAAGCTACCATGCATGTACCCTAAAGAAGGGTGGGGAAGGAATGTGTTTAGGTTACAAGTTCATCTTATTGCAGCAAACATGGCTGTGAAGAAAGGGAAGAAGGATTGGAAATGGAAGACCAAAGTGGTTTTGTGGAGTAAGTGTAGACCAATGATGGAGCTTTTTAGATGCAATGATTTGGTTAAGCATGAAGGTGATTGGTGGTATTATGAGGTTGATGCGAAGAGGTTGGAACAGAAGGTTTCTTTGCCTGTTGGGTCATGCACCTTGGCTTTGCCTCTATGGGAACAAGGAATCGACAAAGTATATGACTTGTCCAAAATCAAACGAAGCGTAACAAGCATGTCTAGAGCAAAACGTGAAGCCTATGCAACAGTGCTCCACTCTTCTAATAGCTATGTTTGTGGTGCAATTACTTTAGCACAAAGCCTCCTTCAAACTGGAACCAAACGTGATCTCATTCTCCTCATCGACACTTCAATCTCCACTGCCAAACGCCGCGCACTCGCCACAGCCGGCTGGAAAATCCGATTCATTTCTCGGATTCGAAATCCCAAAGCCAAGAATGGTACATATAATGAGTATAACTACACCAAGTTTCGTTTGTGGCAGTTAACTGATTATAACAAAATCATTTTCATTGATGCTGATATCATTGTACTTCGAAACCTTGATATTCTCTTTCATTTCCCTCAAATGTCTGCTGTGGGGAATGATCAATCTATATTTAACTCTGGTGTTATGGTCATTGAACCCTCCAATTGCACGTTTCAAGTTCTTATGGATCTTCGAGATGATGTTGTTTCATATAATGGGGGTGATCAAGGGTTTCTTAACGAGATCTTTGTGTGGTGGCACAGGTTGCCAAGGAGAGTAAATTTCTTGAAGAATTTCTGGGCTAACACAACCTTGGAAGCAAGAGTGAAAAATGGTTTGTTCGGTGCAGACCCACCCAAGTTGTATGCCATTCATTACCTAGGTTTGAAACCATGGAATTGCTACAGGGACTATGATTGTAACTGGGACATAGAAGACCAAAGGGTTTATGCAAGTGACGTGGCACACCAAAGGTGGTGGAAGTTGCATGATGGAATGCATGAGAGGTTGAAGAGTATGTGTAGGTTAACTACAAAACGTAGGATTGAGTTGAATTGGGATAGGATGAAAGCTCGCAAGTTGGGATTACCGGATGAACATTGGAAGATTAATATTACTGATCCTAGAAAATCTGAATCTCTTTTGATGGATTAA 1785 0.4056 MKASSFQKMAKTTPSKAFIIRFNLVCLAIFLSVYATLLLRPSSPVYFNNAASLVRCSLRECHNKVEKSIKMKAVLEEPRVKPESPKKHQTKIEMPSFFSKIGKGLKIGMVNMDEYDVSEWSTKGEATPIYFESVSHFFNWTDLFPEWIDEEEENDVASCPEIPMPEFAQYESMDVIVAKLPCMYPKEGWGRNVFRLQVHLIAANMAVKKGKKDWKWKTKVVLWSKCRPMMELFRCNDLVKHEGDWWYYEVDAKRLEQKVSLPVGSCTLALPLWEQGIDKVYDLSKIKRSVTSMSRAKREAYATVLHSSNSYVCGAITLAQSLLQTGTKRDLILLIDTSISTAKRRALATAGWKIRFISRIRNPKAKNGTYNEYNYTKFRLWQLTDYNKIIFIDADIIVLRNLDILFHFPQMSAVGNDQSIFNSGVMVIEPSNCTFQVLMDLRDDVVSYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEARVKNGLFGADPPKLYAIHYLGLKPWNCYRDYDCNWDIEDQRVYASDVAHQRWWKLHDGMHERLKSMCRLTTKRRIELNWDRMKARKLGLPDEHWKINITDPRKSESLLMD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0622 594 Pfam Glycosyl transferase family 8 304 510 IPR002495 GO:0016757
Lan10g0622 594 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 588 - -
Lan10g0622 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 298 548 IPR029044 -
Lan10g0622 594 CDD GT8_Glycogenin 299 543 - -
Lan10g0622 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 296 546 IPR029044 -
Lan10g0622 594 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 588 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0622 Lan-Chr10 5521402 5525617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0622 71 593 Glycosyltransferase AT4G33330 65.849 0.0 731