Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0620 ATGTCTTCTACCACAAGGGGTGAACAACACCAAACGGTCCCGCTTTCGGTGTTGTTGAAGCGTGAATTGTTGAGCGAGAAGATTGAGAGACCTGAGATTGTGCATGGTCAAGCATGCCATAGTAAGAAAGGAGAGGATTTCACTCTCCTCAAGACCGATCGCCAAAGGCTCGTTGGCGATGGAGTCTCTACATATTCTGTTTTTGGGCTGTTTGATGGACACAATGGATCTGCTGCTGCTGTTTATACTAAGGAGAATCTTCTAGATAATGTTTTAAGTGCAATTCCTCCAGATCTTAATAGAGATGAGTGGGTAGCAGCGTTGCCTAGGGCTTTGGTTGCAGGCTTTGTCAAAACTGATAAAGATTTTCAACAGAAAGCACAAAAATCAGGAACAACTGTAACCTTTGTGATTGTAGACGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCGCGTTGTGTTCTTGAATCTTCTGAAGGTGGGATTTATTATTTGTCAGCAGACCATAGGCTTGAAACAAATGAAGAGGAGAGGGTGCGCATCAGATCTAGTGGGGGCGAGGTTGGTCGGCTAAATACGGGAGGAGGAGCAGAGGTTGGTCCTTTGAGATGTTGGCCCGGCGGATTGTGTCTTTCACGATCTATTGGTGATATGGATATTGGCGAATTTATTGTCCCTGTACCATATGTAAAGCAAGTGAAGCTGTCCACTGGTGGAGGCAGGCTTGTTATCTGTAGCGATGGTGTTTGGGATGCACTATCTGCAGAAGTCGCCCTTGATAGTTGTCATGGCATGCCAGCAGAGGCGGCAGCACCACATATTGTTAAAGAAGCTGTACAAGCAAAAGGACTTAGAGATGATACAACGTGCATCGTTGTTGATATATTGCCTCAGGAGAAGCCACCTACTTCTGTTCCACACACGAAGAAGCCAGTAAAAGTAATGCTCAAGTCTATGTTTCGTAAAAAGTCATCTGAATCATCTTATATTGACAAGGAATACTTGGAGGCCGATGTGGTCGAGGAACTGTTCGAGGAAGGATCTGCAATGCTTTCAGAGAGGTTAGATACAAAATATCCGCTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTGTGTCAAGTAGAGATAAAACCAGGTGAGGGTATTTCAATACACGAGGGTGAACCCATCCCAGGAAAATCGCGTCCTTGGGATGGACCTTTTCTTTGTGCAAGTTGTCAAGAGAAGAAAGAAGCCATGGAAGGGAAAGGAATATCAGGTAGACTTAGCAGCGGAAGTGACGAATAA 1293 0.4478 MSSTTRGEQHQTVPLSVLLKRELLSEKIERPEIVHGQACHSKKGEDFTLLKTDRQRLVGDGVSTYSVFGLFDGHNGSAAAVYTKENLLDNVLSAIPPDLNRDEWVAALPRALVAGFVKTDKDFQQKAQKSGTTVTFVIVDGWVVTVASVGDSRCVLESSEGGIYYLSADHRLETNEEERVRIRSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTGGGRLVICSDGVWDALSAEVALDSCHGMPAEAAAPHIVKEAVQAKGLRDDTTCIVVDILPQEKPPTSVPHTKKPVKVMLKSMFRKKSSESSYIDKEYLEADVVEELFEEGSAMLSERLDTKYPLCNMFKLFMCAVCQVEIKPGEGISIHEGEPIPGKSRPWDGPFLCASCQEKKEAMEGKGISGRLSSGSDE* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0620 430 ProSiteProfiles PPM-type phosphatase domain profile. 27 296 IPR001932 -
Lan10g0620 430 PANTHER ALPHABET, ISOFORM E-RELATED 8 425 - -
Lan10g0620 430 SMART PP2C_SIG_2 57 296 IPR001932 -
Lan10g0620 430 Gene3D - 34 303 IPR036457 -
Lan10g0620 430 CDD PP2Cc 42 296 IPR001932 -
Lan10g0620 430 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 8 425 - -
Lan10g0620 430 SUPERFAMILY PP2C-like 41 296 IPR036457 -
Lan10g0620 430 SMART PP2C_4 29 294 IPR001932 -
Lan10g0620 430 Pfam Protein phosphatase 2C 60 279 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0620 Lan-Chr10 5496563 5502060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0620 4 429 PP2C-type Phosphatase Gene Family AT1G47380 78.037 0.0 682