Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0599 ATGGCGAAATCAAGTGCTGATGATATTGAACTTCGTCGAGCTTGCGTATCTGCAATTGATGATCCAACACAGAAGATCATCATTTCAATTCGCGTTTCTATGAGTCGCGGGATCTTCACAAAATCCTCCAAGCTTGGTCATCAAATGGCAAAGCCTAGGGTTCTCGCTCTCTTCACACAATCAAAAGGTCACAGCACAACTGCTTTTCTTCGAGTTTTGAAATATTCTACAGGAGGGGTTCTTGAGCCTGCAAAACTATACAAGCTGAAGCACCTCTCAAAAGTGGAAGTTATAACTAATGATCCCAGCGGATGTATGTTTACACTGGGATTTGATAACCTTAGAAGTCAGAGTGTGGCTCCTCCTCAGTGGACAATGCGCAGTATTGATGACAGGAATCGCCTCCTTCTCTGCATCTTAAACATCTGCAGAGATGTGTTGGGTCACCTTCCTAAGGTTGTTGGTATAGATGTTGTGGAGATGGCTCTCTGGGCTAAGGAAAACAGACCCTCAGTTTCTACTCCAAGGAATGTGCAAGATGGTGGTCCTGTTGCATTTGCTGTTCCTGAGACCGAGTTGAAAGTCAATTTCGAAAAGGAACTTGTCTCCCAGGCAGAGGAGGAGGAGATGGAGGCTCTTTTGGGAAGTTATGTCATGGGTATCGGGGATGCAGAGGCATTTTCGGAAAGGTTGAAGAGAGAGCTCCAGGCTCTAGAAGCAGCAAATGTGCATGCCATTTTAGAAAATGAACCTTTGATGGATGAGGTTATGCAAGGGCTTGAATCAGCAACAATTTGTGTGGAAGACATGGATGAGTGGTTAGCCACATTCAATGTGAAACTCCGTCACATGAGAGAGGATATTGAATCAATAGAAACCCGCAATAACATGTTGGTGATGCAATCGGTTAATAACAAGTGTGTCATCGAGGAACTTGATAAGCTTCTTGAGCGATTGTGTGTCCCTTCTGAGTACGCAGCCTCTTTGACTGGAGGTTCTTTTGATGAAGCTCGAATGCTTCAGAATGTAGAAGCATGTGAGTGGTTAACTAGTGCCTTGCATGGTATTGAAGCACCTAATCTAGACCCTGCATACGCAAACATGAGAGCTGTATGTTCCCTTCTTTACTTTTCTCAGCGGGGACAGTTGAAGAGACCTGATCATGCTGACCTGCGGTACAAGTGCAGAACATATGCGCGTCTTCTGCAGCATTTAAAGAGTCTTGATAAGAATTCCTTGGGTCCATTGAGAAAAGCATATTGCAGTTCTCTAAACTTGCTTCTTCGTAGAGAGGCCCGTGAGTTTGCAAATGAACTTCGTGCTAGTACTAAAGCATCCAGAAATCCAACTGTTTGGCTTGAAGGGTCCACAGGTTCTGGTCAGAATGCAAATGCTACTGATACTTCTACAGTCTCTGATGCATATGCAAAGATGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTCGAAGTTCCTACACTTGTTCCACCAGGAGGTGTTGCTGATGGCAATAAAGCTGGATATAATGATGATTTGGGAATTATGGACATCAATGAGAATGATAGCAAATCTGGTAAAACTTCTGCAGAGCTTGCAGCTTTAAATGAATCACTTCAGGACTTGCTTAATGGAATTCAAGAAGACTTTTATGCTGTTGTGGATTGGGCGTACAAGATTGATCCTTTACGCTGTATATCAATGCATGGAATTACAGAACGTTATCTCTCTGGTCAGAAAGCCGACGCAGCCGGATTTGTGCGCCTTTTGCTTGGTAACCTGAAGTCTAGGATATCTGTGCAGTTCAGTCGTTTTGTTGATGAAGCTTGCCATGAACTTGAAAGAAATGAGCGCACTATTCGCCAAATGGGTGTCCTGTCCTACATCCCCAGATTTGCAACCCTTGCAACTCAGATGGAGCAGTACATTTCAGGACAGTCTAGGGATTTGGTTGACCAATCATACACTACATTTGTAGGCATAATGTTTGTGACTTTGGAAAAAATTGCTCAAACAGATCCGAAATATGCAGATATGTTTCTACTAGAAAACTATGCTGCCTTTCAGAATAGTTTGTATGAGCTCGCCAACATTGTGCCCATTTTGGCCAAGTTTTATCATCAAGCCAGTGAAGCCTATGAACAAGCTTGTACGCGGCATATTAGCATGATTATATACTATCAATTTGAACGTCTTTTCCAGTTTGCTAGAAGGATTGAAGACTTGATGTTCACTGTTCCACCTGAAGAGATTCCTTTCCAACTTGGACTGTCAAAAATGGATCTTCGGAAGATGTTAAAATCCAGTTTATCTGGGGTTGACCAGTCCATTGCTCTGATGTATAAGAAACTACAGAAGAATTTGGTTTCAGAGGAACTGTTACCTTCCTTATGGGACAAATGCAAGAAGGAATTCCTTGACATGTATGAAGGTTTTGCTCAACTTGTGGCCAAGATTTACCCCACTGAAAATATCCCTTCTGTAGCTGAGATGAGAGAACTTTTAGCTTCCTTGTAA 2544 0.4269 MAKSSADDIELRRACVSAIDDPTQKIIISIRVSMSRGIFTKSSKLGHQMAKPRVLALFTQSKGHSTTAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVITNDPSGCMFTLGFDNLRSQSVAPPQWTMRSIDDRNRLLLCILNICRDVLGHLPKVVGIDVVEMALWAKENRPSVSTPRNVQDGGPVAFAVPETELKVNFEKELVSQAEEEEMEALLGSYVMGIGDAEAFSERLKRELQALEAANVHAILENEPLMDEVMQGLESATICVEDMDEWLATFNVKLRHMREDIESIETRNNMLVMQSVNNKCVIEELDKLLERLCVPSEYAASLTGGSFDEARMLQNVEACEWLTSALHGIEAPNLDPAYANMRAVCSLLYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNSLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNANATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVADGNKAGYNDDLGIMDINENDSKSGKTSAELAALNESLQDLLNGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGNLKSRISVQFSRFVDEACHELERNERTIRQMGVLSYIPRFATLATQMEQYISGQSRDLVDQSYTTFVGIMFVTLEKIAQTDPKYADMFLLENYAAFQNSLYELANIVPILAKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDLMFTVPPEEIPFQLGLSKMDLRKMLKSSLSGVDQSIALMYKKLQKNLVSEELLPSLWDKCKKEFLDMYEGFAQLVAKIYPTENIPSVAEMRELLASL* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0599 847 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Lan10g0599 847 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Lan10g0599 847 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 376 846 - -
Lan10g0599 847 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 371 - -
Lan10g0599 847 Pfam Exocyst complex component Sec3 542 830 IPR019160 GO:0000145|GO:0006887
Lan10g0599 847 Pfam Exocyst complex component Sec3 223 371 IPR019160 GO:0000145|GO:0006887
Lan10g0599 847 Coils Coil 221 248 - -
Lan10g0599 847 PANTHER SEC3/SYNTAXIN-RELATED 376 846 - -
Lan10g0599 847 PANTHER SEC3/SYNTAXIN-RELATED 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0599 Lan-Chr10 5231962 5244355 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0599 10 5231962 5244355 Lan5g0415 5 9028545 9055374 LSH
Lan10g0599 10 5231962 5244355 Lan15g1196 15 20459964 20460973 PCT
Lan15g1196 15 20459964 20460973 Lan10g0599 10 5231962 5244355 PCT