Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0595 ATGGGCTGGCTTAGCAAAATTTTTAAAACCTCTGACCATAAGATTTCAGAAGGGCATTATCATAATAGTCATGCAAACTATAAAGATGATGCGGATTCTTACACACCATCAACTTCAGGGGATGTTTGGCCCAAGAGTGAGGATGAAGATATTGATCGTGCTATTGCACTATCTCTTGTAGAAGAAAATCAGAAAGGAAGCGGTGTAAATGACTATAAGTCACAATTGGAAGAAGATGAGCAACTTGCCCGAGCTATAGAACAAAGCCTTATTGTCGAGTCTCCACCCAGACCTAGATACGGAAATGAAAATATGCATCAACCGGTTCCATTGTATTTCCCAATGGGGTACAGGATTTGTGCTGGCTGCAATACTGAGATTGGTTATGGGCGATATTTAAATTGCTTGAATACATTCTGGCATCCTGAATGTTTCCGTTGCCGTGCCTGCAACTTACCAATCTCTGATTATGAGTTTTCCACATCTGGCAATTACCCTTACCATAAATCATGCTACAAGGAAAGCTACCATCCAAAATGTGATGTCTGCAAGCACTTTATTCCGACAAACCATGCTGGTCTTATTGAATATAGGGCACATCCATTTTGGATTCAGAAATATTGCCCTACTCATGAACATGATAATACCCCACGCTGTTGCAGCTGTGAGCGAATGGAGCCACGAGAGGCAGGATATATTGGTCTTAATGATGGCCGGAAACTCTGCTTAGAATGTCTGGACTCTGCCATCATGGATACTAATGAATGTCAACCCCTATACACTGATATACAAAAATTCTATGAAAGCCTAAATATGAAACTGGACCAGCAAGTTCCACTACTCTTGGTTGAAAGACAAGCACTGAATGAAGCAAGAGAAGGAGAGAAGAATGGCCACTATCACATGCCTGAGACCAGAGGACTGTGCCTCTCAGAAGAACAAACTATCAGCTCGATTTCGAGACGGCCTAGACTTGGGACTGGAAATAGAGCAATGGACATGAGAACACAACCATACAAACTGACTCGACGCTGTGATGTGACTGCAATTCTCATTTTATTTGGTCTTCCAAGATTGCTTACCGGTTCGATCTTAGCTCATGAGATGATGCATGCATGGCTACGGCTTAGAGGTTATCAGACTCTAAGTCAAGATGTTGAAGAAGGTATCTGTCAGGTTTTGGCTCATATGTGGTTGGAGTCTGAGCTCTCTTCTGCATCCGGCAGCAACCTTTTATCAGCTTCGTCCTCGTCTGCATCATATGCTTCTAGAAAAGGTAAAAGCCCTGCTTTTGAGAGGAAGCTTGGGGAGTTCTTCATGCACCAGATTGAATCTGATATTTCCCCTGTTTATGGAGATGGATTTAGGGCTGGTCAAATAGCAGTGCGTAAATATGGTTTACAAAAGACCCTTAACCATATCTGGATGACGGGTACTTTTCCATTTTGA 1449 0.4244 MGWLSKIFKTSDHKISEGHYHNSHANYKDDADSYTPSTSGDVWPKSEDEDIDRAIALSLVEENQKGSGVNDYKSQLEEDEQLARAIEQSLIVESPPRPRYGNENMHQPVPLYFPMGYRICAGCNTEIGYGRYLNCLNTFWHPECFRCRACNLPISDYEFSTSGNYPYHKSCYKESYHPKCDVCKHFIPTNHAGLIEYRAHPFWIQKYCPTHEHDNTPRCCSCERMEPREAGYIGLNDGRKLCLECLDSAIMDTNECQPLYTDIQKFYESLNMKLDQQVPLLLVERQALNEAREGEKNGHYHMPETRGLCLSEEQTISSISRRPRLGTGNRAMDMRTQPYKLTRRCDVTAILILFGLPRLLTGSILAHEMMHAWLRLRGYQTLSQDVEEGICQVLAHMWLESELSSASGSNLLSASSSSASYASRKGKSPAFERKLGEFFMHQIESDISPVYGDGFRAGQIAVRKYGLQKTLNHIWMTGTFPF* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0595 482 Coils Coil 69 89 - -
Lan10g0595 482 Gene3D Cysteine Rich Protein 116 179 - -
Lan10g0595 482 PANTHER PROTEIN DA1-LIKE 1 482 - -
Lan10g0595 482 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 146 201 - -
Lan10g0595 482 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 77 96 IPR003903 -
Lan10g0595 482 Pfam Ubiquitin interaction motif 46 59 IPR003903 -
Lan10g0595 482 Pfam Ubiquitin interaction motif 77 90 IPR003903 -
Lan10g0595 482 SMART lim_4 119 171 IPR001781 -
Lan10g0595 482 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 46 65 IPR003903 -
Lan10g0595 482 ProSiteProfiles LIM domain profile. 118 178 IPR001781 -
Lan10g0595 482 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 112 145 - -
Lan10g0595 482 MobiDBLite consensus disorder prediction 24 46 - -
Lan10g0595 482 PANTHER PROTEIN DA1-RELATED 2 1 482 IPR045218 -
Lan10g0595 482 ProSitePatterns LIM zinc-binding domain signature. 120 154 IPR001781 -
Lan10g0595 482 SMART uim 77 96 IPR003903 -
Lan10g0595 482 SMART uim 46 65 IPR003903 -
Lan10g0595 482 CDD LIM_DA1 120 172 - -
Lan10g0595 482 Pfam Protein DA1 270 476 IPR022087 -
Lan10g0595 482 Pfam LIM domain 120 174 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0595 Lan-Chr10 5149983 5156457 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan10g0595 DA1-like 1e-98 CL0126