Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0587 ATGACTTCCGATGGAGCAACGTCGGCGGCGAGCCGGAGGAAACCGTCGTGGAGGGAGAGAGAGAACAACCGGAGGAGAGAGAGGAGGAGAAGAGCGATAGCTGCGAAGATATATGCTGGTCTTCGAGCTCAAGGGAACTATCGTTTGCCGAAGCATTGTGATAACAATGAAGTGTTGAAAGCTCTATGTGAAGAAGCTGGTTGGAGAGTAGAAGAAGACGGAACCACTTATCGCAAGGATTGCAAGCCACCTCTAGCCAATGCTGCAGGCACCTCCACAAGAAACACTCCTTTCACATCACAAAATCCAAGTCCCATGTCTTCATATTTTCCTAGTCCAATTCCTTCTTACCAAGTCAGTCCTTCCTCTTCCTCTTTCCCAAGCCCTTTCCGTTTCGATGGGGACAACACACCAAGCTTCTTTCCATGCATGCACAATGACATTTCAGCCTCTCTCACTCCTCTGAGAATATCAAACAGCGCCCCTGTAACACCACCTATCTCATCGCCAACATCAAGAAATCCTAAACCAATTCCAACATGGGAGTCTATTGCCAAACAATCAATGGCCTCCTTCAACTACCCTTACTTTGCAGCTTCCGCACCTGCTAGCCCTACACACCGTCACCTTTACACCCCAGCCACAATACCGGAATGTGACGAGTCTGACACTTCCACTACTGCATCTGGCCAGTGGCTGAAGTTCCATGCATTTGCACCTTCTGCATCTGCAATGCCAACATCTCCAACCTTTAATCTTATTAAAGCTGTTACTCAGCACAGTGTACCAGATAACTCAATCCAAGATATGAGAAGTTCTGAAAGAGAGTTTGGGGTACAGGTAAAGCCTTGGGTTGGGGAAAAAATCCATGAAGTAGGATTGGATGATTTGGAACTCACACTTGGAAGCAGGAAGACACAAAGTTAG 927 0.4736 MTSDGATSAASRRKPSWRERENNRRRERRRRAIAAKIYAGLRAQGNYRLPKHCDNNEVLKALCEEAGWRVEEDGTTYRKDCKPPLANAAGTSTRNTPFTSQNPSPMSSYFPSPIPSYQVSPSSSSFPSPFRFDGDNTPSFFPCMHNDISASLTPLRISNSAPVTPPISSPTSRNPKPIPTWESIAKQSMASFNYPYFAASAPASPTHRHLYTPATIPECDESDTSTTASGQWLKFHAFAPSASAMPTSPTFNLIKAVTQHSVPDNSIQDMRSSEREFGVQVKPWVGEKIHEVGLDDLELTLGSRKTQS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0587 308 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 307 - -
Lan10g0587 308 MobiDBLite consensus disorder prediction 77 107 - -
Lan10g0587 308 MobiDBLite consensus disorder prediction 13 28 - -
Lan10g0587 308 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 307 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lan10g0587 308 Pfam BES1/BZR1 plant transcription factor, N-terminal 11 138 IPR008540 -
Lan10g0587 308 MobiDBLite consensus disorder prediction 1 29 - -
Lan10g0587 308 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0587 Lan-Chr10 4986005 4988489 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lan10g0587 BES1_N 1.7e-59 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0587 10 4986005 4988489 Lan3g1250 3 24584275 24586634 LSH