Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0580 ATGGCTCAACGTTCTTCCTCCGATACTCGCCTCAACATTCCTCCGTTTCAGATCTCCAAAGATCTCCCTGGCTCTGACAATCCCCTTCCACTTTCACCACAATGGCTTCTTCCGAAGCCAGGGGAGAGTAAACCTGGAATGGGAACTGTGGAAAACCGTGTGAATCCAATTTCACCATTCGGCAATCACTCAGAGACTGGTAAGACATCTGGAAATGGTGTGGATGTGCACGATGCCCAGAAGAAGAAAAATGTCTTCAGGCCATCCATGCTTGACTCAGAAACTGGACGCCACGATCGTTGGCGTGATGAAGAGAGAGACACTAAGTCCTCCATACGTAAGGATCGTTGGAGGGATGGAGACAAAGACCTCAGTGATACTCGGAGAGTGGATCGGTGGACAGAAAATTCGTCTACAAAGAACTTTGGAGAAGTACTTCGCAGTCCATCTGATAGGTGGAATGATTCAGGAAACAAGGAAACTAATTTTGATCAGCGTCGTGAGAGTAAGTGGAACACACGCTGGGGTCCTGATGATAAGGAGACAGAAGGTCTTCGTGAAAAATTGAATGACTCTGGAAAAGACAGTGATGTTCATCATGAAAAGGGCTTGTCTCACATTTCTAATCATGTGAAGGATGAGAAGCATGGTGATCATTATCGGCCATGGAGACCAAGCTTCTCACAAAGCCGTGGAAGGGCGGAGCCTATCCATCCCCCAAACATAACACCAAACAAGCAGGCTTCTACATTTTCCTATGGGCATGGCCGTGGGGAGAATACTCCCCCAGCTTTTACTGTTGGACATGGACGAGCTGGCTCTGCTGGTAGCTCAATGAATAATAGCACTTACTCTGGAACTGTATTGGATAAAGTTGAAAGTGGACATGGAGAACTTTGTGCCTTTAGATATAATAGGACAAAATTGCTTGATGTGTACAGGTTGACTGATATGGGTGCAAATAGAAAACTAGTAGATGATTTTGTGCAAGTACCTAATATTACACAGAATGAACCATTGGAGCCTCTAGCTCTTTCAGTCCCAAATTCTGAGGAACTGTCAGTCTTAAAGGGTATTGAGAAAGCCGAAATAATTAGTAGCAGTGCACCTCAGGTGTCAAAAGATGGAAGGGGTTCAACAGATTTTACTCATTCAAGCCGAATGAAGCCCCAAGAGAGAAGTGAGGACGGAAGTTCTTATAGAGTGGCTGAGGAGTTGCCCATTATTAGAGATTCATCCTTTGAAGGAAATAGTTCTGTTCATCCTGGTGCTGCATGGCGATCTACGCCCTTAGGTGAACATTCAAGCCCTCTCTTGCATGATAGAAGAGATGTGCCTAGTGATGTTAGATCAAGAAAAGCAGATAAGAGCTCACACCATCCAAAAGATTCTCATAATCAGTCGGAAAGTAATTTGGCTCATTTATCTGACTCTAAAGATGTAAGTAAGTGGCAAGCTAGTGATGATCCTATGATCAAAAGGAAGCTTTCGGGCATTTTTGACAGTGAACTCGAAACCAGGAGAGTTCCACAGACTGCTCCAGAGGAACTGTCTCTTTTTTACAAAGATCCTAAGGGCCAAATTCAAGGCCCATTTAAAGGAATTGATATAATTGGATGGTTTGAGGCTGGATATTTTGGTATTGATTTAACTGTTCGTCTGGAAAACTCAGCTGCTGACTCGCCATGGTTGTCTCTTGGTGATGCAATGCCCCATTTACGAGCTAAAGTCCGACCACCACCTGGGTTTCCATCACCAAAGCCTACTGATTTTATTGATATACCTGCCCAGCAAAGTTCCAGTACGTTTGGGAATACCCTTCCTGGTTTGAGTGAGGCTGATATGTTGAGAAGTGATTCTAGGCACATGCACAGTCCTGCTATAGAATCTGAAAATAGGTTTCTGGTGTCACTCATGTCTGGTAACAAGGACAGTCCTCCGCTGGATGGTCTGACCTTACCACAAGGTTTACAAGATTTTGTTGGAAATAATTCCGGTAGTCTGGGCCCAGCTGGAATAGATAGTGGAAACAACCTTCTCTTGATAGCAAAGAGGATGGCACTTGAACGACAGAGGTCCTTACCCAATCCTTATCCATTTTGGCCGGGGCAAGATGCTGCGGCACTTACGCCAAAATCAGATATTGTCCCAGATTCAGCACTGCATTCAAATTTTTTGTCTTCAGTGGGTGACAATTCACGCCTACCTCAGTCCCAAAATTCTGAGTTGTCGATTGTCCAAGGATTATCCGACAGGACATCTGCAGGCTTAAATAATGGCATTGCTGGATGGCCAAATTATCCTTTACAAGGTGGATTGGATTCCCTTCAGAATAAAGTTGACATACATCATGATCAGAATTTCCCTCAAGGGCAATTTGGAATTCAACAACAAAGATTGCAAGCACAAAACCAATTGTCTTTAGGCAATTTGTCGTCTCATGCTACTGATAACCCATCTAATATGTTGGCGGCAGAAAAGCTACTTTCTTCTGGTTTATCGCAAGATCCACAGGTATTGAATTTGTTGCAACAGCAATACTTGTTGCAGTTGCATTCTATGGCAGCTGCTCCAACACCGCAGGTGCCATTGTTAGATAAACTTCTGTTGCTTAAGCAACAACAGATGCAAGAGGAGCATCAGCAGCTATTGCGGCAGCAACAGCAACATCTGCTTTCTCAATTGCTGCAGGACCAACAGTTTAATCAGTACTTTGGAGATTCCTCGTATGGACGGTTGCAAGGAAGTGGAATACCAATGGGAAATTTGCACGTAGATCCTTCTCAACTTCGACCACTGCAAGAGATTTTTGCCATGAGCTCTCAGACACCAAATCCTACTGTGCATGATGAGCTTAGTAGTAATTATTTGAATTTACCTCCGCAAGTTAGCCAAGACATAAGTTATAATGTAAGAAGTGAAGCTTCTGTACATCTGCCGCACCAATTATTTGAGAATACTATTCAGAAAAATTGGGGCACTTCTCTTCCTGAACAAATTGTTGAAACACATCAGAAGGAAACATTCCCAACATCGACTCTTGCTGAATGTTCTCCATTGCATGATCAGAACAGATCGGAAGAGGAACCCCACAGTGTGCAGAAACCTCTTTCTGTTTCTGACGTCACTGCTAAGTCTGTGGTGGAGGTGCCAGCTAAGACTTCTAGATGTGTTGACACTGTCATAACTGTGGCTTCTCAGCTTGATGAGAATTCTGGACATTTACAGCACATTGTGCCTGTTGCTATATCTTCAGCGGCATCTCATGGGATTGAGTTGCCACCTGTGAGTTATCTTGTTAAAGATGTGGAGAGCAAATCAGATATTGTGCTTGAAAATCAGCAAGCTGGAAGAGATGACTTCAATGTTGAGTCCTTTGTGGTAGATGCACGGAATATTGAAGCATGCGAGCCTAAAAAGTCCATTGAGAAAAAATCTAAGAAGCAAAAATCTTCCAAAGCTCAGTCATCTAATCAAGAAAAGGGATTGCTTAAAAACATGGCTGTGCAGCAGTCAGAAGCTACTTCCCTGCCTGCTAGTCTTCCAGAAAGCATCCCTGAAAAAGGTGCTGTGAGTGAGTCCACCAAGGCCATTGGTTCAGTTCCCAAACAGAATACTGAACTACATGCAGGACGAGCTTGGAAACCTGCTCCTGGTGTGAAGCCAAAGTCTTTAATAGAAATTCAACTGGAAGAACAAAAGAAAGCAGAGACAGAAGTGCTTGTATCTGAGATTGCTACTTCCGTCAATTCCATGAATTTGACAAGTCCGTGGGCAGGGGTCATTGCCAATCCAGAGTCTGGAAAGATTTCTAGTGAAAGTCAAGGAGGAGGCAACAGTGAATATCTGATCAAACCCAAAACCTCTGAAAACTTGAAGAGCAAGAAAAGTCCACTACATGATCTATTGGCAGAAGAAGTTTTGAAGAAATTTAACGAAATAGATTCTGAGATTCCAGATGACATGTCCTCACAAGTTATAGCTGTTCATTCAGAATCACTGGATGATTCCAACTTTATTGAGGCCAAAGAAAGTAAAAGAAGCCGAAGAAAGTCAGCCAAATCAAAGGGTTCAGGGGCTAAAGCCTCTGCTCCTGTTGCGTCTAATGAAGTGCTCATAGCTTCAAGTCCTGTTGAAAAGGGGAAAGTTTCCCGCCCTTTGCAGCAGGAGAAAGAAGTATTGCCTGCCATTCCTGCAGGACCCTCACTGGGAGATTTTGTTCTTTGGAAAGGAGGGCGGGAGGCTCCAAACCCATCTCCTTCTCCAGCATGGTCTACTGACTCTGGTAGGGTTCCTAAGCCAACTTCATTAAGAGACATTCTAAAGGAGCAGGAAAAAAAGGGTTCTTCTGTAGTGCCTGCTAGCCCAATGCCTACCCCTCAGAAATTACAGCCTGCCCAGGCTAATTGGAATAGTGGTTCTTCCCGGTCAATTTCAGCTTTCTCTCCATCTAAAGCGGCCTCTCCAATCCAAATTAACTCCCACGCTTCTTCTCAGTCAAAATACAAAGGGGATGATGACTTGTTTTGGGGTCCAATTGAGCAATCCAAGCCAGAAACTAAGCAGTCAGATTTTCCTCAGCTTTCAAGCCAGGGGAGCAGGGGGTCAAAAATTGTGCCCGTTAAAGGTAATACACCTGTGTCATTAACTCGACAAAAATCAGCGGGTGGCAAACCAACTGAACAGTCTCTATCATCATCACCTGCCTCTTCTCAATCAATGTCGAAATTGAAAAAAGACGCAATGACAAAGCATTCTGAGGCCGTGGGCTTCAGAGACTGGTGTGAAAATGAGTGTGTGAGGCTTATTGGGACAAAAGATACAAGTTTCCTTGAATTTTGTTTGAAGCAATCCAAATCTGAGGCGAAGATGCTTCTTACTGAAAACCTTGGCTCATTTGACCCAGACCATGAGTTCATTGATAAATTCCTCAATTACATGGAGATGTTACCATCAGATGTTTTGGAAATAGCTTTTCAGAGTAGAAGTAATCAGAAAATTAGTGGAGTTGGTGCTGGACGCATGCTATCTGCAAATGCAGCAGCAGCAGCCAATATACATGATGTGGACCACAGAGAAGGATCCTCAAAAGGTGGTGGTGGTGGTGGTGGAAAGAAGAAAGGTAAGAAAGGGAAAAAGGTGAGTCCTTCAGTTTTGGGATTTAATGTTGTGAGTAACCGGATCATGATGGGTGAGATACAGACAGTAGAAGATTAA 5217 0.4374 MAQRSSSDTRLNIPPFQISKDLPGSDNPLPLSPQWLLPKPGESKPGMGTVENRVNPISPFGNHSETGKTSGNGVDVHDAQKKKNVFRPSMLDSETGRHDRWRDEERDTKSSIRKDRWRDGDKDLSDTRRVDRWTENSSTKNFGEVLRSPSDRWNDSGNKETNFDQRRESKWNTRWGPDDKETEGLREKLNDSGKDSDVHHEKGLSHISNHVKDEKHGDHYRPWRPSFSQSRGRAEPIHPPNITPNKQASTFSYGHGRGENTPPAFTVGHGRAGSAGSSMNNSTYSGTVLDKVESGHGELCAFRYNRTKLLDVYRLTDMGANRKLVDDFVQVPNITQNEPLEPLALSVPNSEELSVLKGIEKAEIISSSAPQVSKDGRGSTDFTHSSRMKPQERSEDGSSYRVAEELPIIRDSSFEGNSSVHPGAAWRSTPLGEHSSPLLHDRRDVPSDVRSRKADKSSHHPKDSHNQSESNLAHLSDSKDVSKWQASDDPMIKRKLSGIFDSELETRRVPQTAPEELSLFYKDPKGQIQGPFKGIDIIGWFEAGYFGIDLTVRLENSAADSPWLSLGDAMPHLRAKVRPPPGFPSPKPTDFIDIPAQQSSSTFGNTLPGLSEADMLRSDSRHMHSPAIESENRFLVSLMSGNKDSPPLDGLTLPQGLQDFVGNNSGSLGPAGIDSGNNLLLIAKRMALERQRSLPNPYPFWPGQDAAALTPKSDIVPDSALHSNFLSSVGDNSRLPQSQNSELSIVQGLSDRTSAGLNNGIAGWPNYPLQGGLDSLQNKVDIHHDQNFPQGQFGIQQQRLQAQNQLSLGNLSSHATDNPSNMLAAEKLLSSGLSQDPQVLNLLQQQYLLQLHSMAAAPTPQVPLLDKLLLLKQQQMQEEHQQLLRQQQQHLLSQLLQDQQFNQYFGDSSYGRLQGSGIPMGNLHVDPSQLRPLQEIFAMSSQTPNPTVHDELSSNYLNLPPQVSQDISYNVRSEASVHLPHQLFENTIQKNWGTSLPEQIVETHQKETFPTSTLAECSPLHDQNRSEEEPHSVQKPLSVSDVTAKSVVEVPAKTSRCVDTVITVASQLDENSGHLQHIVPVAISSAASHGIELPPVSYLVKDVESKSDIVLENQQAGRDDFNVESFVVDARNIEACEPKKSIEKKSKKQKSSKAQSSNQEKGLLKNMAVQQSEATSLPASLPESIPEKGAVSESTKAIGSVPKQNTELHAGRAWKPAPGVKPKSLIEIQLEEQKKAETEVLVSEIATSVNSMNLTSPWAGVIANPESGKISSESQGGGNSEYLIKPKTSENLKSKKSPLHDLLAEEVLKKFNEIDSEIPDDMSSQVIAVHSESLDDSNFIEAKESKRSRRKSAKSKGSGAKASAPVASNEVLIASSPVEKGKVSRPLQQEKEVLPAIPAGPSLGDFVLWKGGREAPNPSPSPAWSTDSGRVPKPTSLRDILKEQEKKGSSVVPASPMPTPQKLQPAQANWNSGSSRSISAFSPSKAASPIQINSHASSQSKYKGDDDLFWGPIEQSKPETKQSDFPQLSSQGSRGSKIVPVKGNTPVSLTRQKSAGGKPTEQSLSSSPASSQSMSKLKKDAMTKHSEAVGFRDWCENECVRLIGTKDTSFLEFCLKQSKSEAKMLLTENLGSFDPDHEFIDKFLNYMEMLPSDVLEIAFQSRSNQKISGVGAGRMLSANAAAAANIHDVDHREGSSKGGGGGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQTVED* 1739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0580 1738 Pfam GYF domain 520 565 IPR003169 GO:0005515
Lan10g0580 1738 MobiDBLite consensus disorder prediction 367 401 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 55 73 - -
Lan10g0580 1738 SMART gyf_5 517 572 IPR003169 GO:0005515
Lan10g0580 1738 MobiDBLite consensus disorder prediction 136 152 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 1454 1499 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 1167 1186 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 1516 1577 - -
Lan10g0580 1738 ProSiteProfiles GYF domain profile. 516 567 IPR003169 GO:0005515
Lan10g0580 1738 MobiDBLite consensus disorder prediction 1339 1581 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 75 135 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 153 222 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 380 400 - -
Lan10g0580 1738 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1738 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 1139 1162 - -
Lan10g0580 1738 CDD GYF 516 573 IPR003169 GO:0005515
Lan10g0580 1738 MobiDBLite consensus disorder prediction 436 467 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 1687 1715 - -
Lan10g0580 1738 SUPERFAMILY GYF domain 508 573 IPR035445 -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 1 245 - -
Lan10g0580 1738 MobiDBLite consensus disorder prediction 413 487 - -
Lan10g0580 1738 Gene3D - 504 580 IPR035445 -
Lan10g0580 1738 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0580 Lan-Chr10 4938556 4947459 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0580 10 4938556 4947459 Lan5g0426 5 9237737 9246162 LSH
Lan10g0580 10 4938556 4947459 Lan3g0851 3 16222816 16234430 PCT
Lan3g0851 3 16222816 16234430 Lan10g0580 10 4938556 4947459 PCT