Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0575 ATGTCCATTTCCTTCTCTTCACTCCCCGCTCGTCTCACACTCCTCGCTCTCTTCTCCGCCACCACCTTCTACTGCTTCTACAAATCTCGCCGCCTCAGAAACCTTAAATTCTCCCTCTCTAACCGTTTCTCCAACCCTAACCCTAAAAAACCTAAGATCGTATTCCTCTCTCAAACCGGTACTTCCAAAACCCTAGCTCAACGCCTCCACGAATTGCTCTCATCCAACGACGTCGCTTTTGACCTTGTCGATTCCAAAAGCTACGAGCCCGAGGACCTTGCAAAAGAAACGCTTGTTCTTGTTGTAGCTTCTACTTGGGAAGATGGAAAGCCACCTTCTGGTTCTAACTTCCTTGCCACGTGGCTATCTGAGACCGCCACTGATTTTAGGGTTGGGTCTCTGTTGCTGTCGCGGTGCAGGTTCGCGGTGTTTGGCGTTGGGAGCAGGGCGTATGGAGAGACGTTTAATGCGGTGGCGAGGGATTTCGCTGCGCAGATGAAGGCGCTGGGCGCGGCGGAGATTGTTCCGATGTGGGAAGGGGATGTGGATGGGGGGAATTTGGATGAGGATTTTGAGATTTGGTCTGGGAAGGTTGTTGGGGTTTTGAAAGGTGGTGGTGTATTGGAAAATGGTGGTGTATTGGAAAATGGTGTTGTTGATGGTGATGGTGGAGAATTTGGTAATGATTCGAGCTTTGAGGATTCTGATGAAGAGAGCGAGCCAGAATCAGAGATTGTTGATCTTGAGGATATTGCTGGTAAGGCACCCTCGAGGAAAAATGTGGCAGTTGTTGAAAGTAATGGGAAATTGAATGGCAAAAAAGAAATGGTGACTCCTGTGATTAGGGCAAATTTAACGAAGCAGGGATATAAAATTATTGGTTCACATAGCGGTGTTAAGATTTGTAGATGGACTAAATCACAGCTTCGTGGTCGAGGCGGTTGCTACAAGCATTCATTTTATGGAATTGAGAGTCATAGGTGCATGGAGGCAACCCCTAGTTTGGCATGTGCAAATAAATGTGTTTTCTGCTGGAGGCATCACACAAATCCAGTAGCGAAAAGTTGGCAGTGGGAGATGGATGATCCAGTAGAGATTGTAAATTCAGCAATAGACCTGCATACAAATATGATTAAACAAATGAAAGGAGTTCCAGGTGTCACCTTGGAGCGATTAAATGAAGGTCTCTCTCCAAGACATTGTGCATTATCTCTAGTTGGTGAACCGATCATGTATCCAGAGATAAATACACTTGTTGATGAGCTGCACAAAAGGAGAATTTCCACTTTTCTTGTGACAAATGCACAATTTCCAGATAAAATTAAGTCGCTGAGGCCTATCACCCAGTTATATGTCAGTGTAGATGCTGCTACAAAGGACTCTTTGAAGGCGATTGATAGGCCACTTTTTGGAGATTTCTGGGAGCGATTCATTGATTCCTTGACTGCTTTAAAGGAAAAACATCAGCGGACTGTATACCGCCTGACTCTGGTGAAAGGTTGGAATACGGAAGATATTGATGCTTATTTTAAGCTCTTTAGTATAGGAGAACCTGACTTTATTGAAATCAAGGGAGTTACATATTGTGGCTCGTCTGCGACATCAAAATTGACAATGGAAAATGTCCCTTGGCATGCTGATGTGAAAGCTTTCTCAGAGACCCTGTCTCTGAAAAGCCAAGGGGAGTATGAAGTTGCTTGTGAGCATGCTCATTCGTGTTGTGTCCTCTTAGCAAAAACTAAGAAGTTCAAGATTGATGGCCAGTGGTATACATGGATAGACTATGAAAAATTTCATGACCTGGTGGCTTCTGGAAGTACTTTTGACAGTACAGATTACATGGCTGCCACACCATCCTGGGCCGTCTACGGAGCAGAGGAAAGTGGATTTGATCCTGCACAATTGCGATTTAAGAAGGAGAGACATCATAAGTCAACCCGCGTTCAATCAAGCTAG 1956 0.4494 MSISFSSLPARLTLLALFSATTFYCFYKSRRLRNLKFSLSNRFSNPNPKKPKIVFLSQTGTSKTLAQRLHELLSSNDVAFDLVDSKSYEPEDLAKETLVLVVASTWEDGKPPSGSNFLATWLSETATDFRVGSLLLSRCRFAVFGVGSRAYGETFNAVARDFAAQMKALGAAEIVPMWEGDVDGGNLDEDFEIWSGKVVGVLKGGGVLENGGVLENGVVDGDGGEFGNDSSFEDSDEESEPESEIVDLEDIAGKAPSRKNVAVVESNGKLNGKKEMVTPVIRANLTKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVAKSWQWEMDDPVEIVNSAIDLHTNMIKQMKGVPGVTLERLNEGLSPRHCALSLVGEPIMYPEINTLVDELHKRRISTFLVTNAQFPDKIKSLRPITQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNTEDIDAYFKLFSIGEPDFIEIKGVTYCGSSATSKLTMENVPWHADVKAFSETLSLKSQGEYEVACEHAHSCCVLLAKTKKFKIDGQWYTWIDYEKFHDLVASGSTFDSTDYMAATPSWAVYGAEESGFDPAQLRFKKERHHKSTRVQSS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0575 651 Pfam Flavodoxin 53 194 IPR008254 GO:0010181
Lan10g0575 651 MobiDBLite consensus disorder prediction 219 241 - -
Lan10g0575 651 Pfam Wyosine base formation 516 579 IPR013917 -
Lan10g0575 651 SUPERFAMILY Flavoproteins 49 202 IPR029039 -
Lan10g0575 651 Pfam Radical SAM superfamily 333 512 IPR007197 GO:0003824|GO:0051536
Lan10g0575 651 Gene3D - 28 206 IPR029039 -
Lan10g0575 651 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 6 644 IPR034556 GO:0008033|GO:0051539
Lan10g0575 651 Gene3D Aldolase class I 259 591 IPR013785 -
Lan10g0575 651 PRINTS Flavodoxin signature 52 65 IPR001094 GO:0010181
Lan10g0575 651 PRINTS Flavodoxin signature 100 111 IPR001094 GO:0010181
Lan10g0575 651 PRINTS Flavodoxin signature 138 148 IPR001094 GO:0010181
Lan10g0575 651 PRINTS Flavodoxin signature 163 182 IPR001094 GO:0010181
Lan10g0575 651 MobiDBLite consensus disorder prediction 227 241 - -
Lan10g0575 651 SUPERFAMILY Radical SAM enzymes 334 513 - -
Lan10g0575 651 ProSiteProfiles Radical SAM core domain profile. 321 564 IPR007197 GO:0003824|GO:0051536
Lan10g0575 651 CDD Radical_SAM 333 526 - -
Lan10g0575 651 SFLD tRNA wybutosine-synthesizing 272 583 IPR034556 GO:0008033|GO:0051539
Lan10g0575 651 ProSiteProfiles Flavodoxin-like domain profile. 51 199 IPR008254 GO:0010181
Lan10g0575 651 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 6 644 - -
Lan10g0575 651 SFLD tRNA wybutosine-synthesizing 272 583 - -